Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 AIRN-201ENST00000601203 4374 ntBASIC19.17■□□□□ 0.66
VARSP26640 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
VARSP26640 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 AL158047.1-201ENST00000445918 881 ntBASIC19.17■□□□□ 0.66
VARSP26640 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.17■□□□□ 0.66
VARSP26640 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.17■□□□□ 0.66
VARSP26640 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.17■□□□□ 0.66
VARSP26640 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.17■□□□□ 0.66
VARSP26640 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.17■□□□□ 0.66
VARSP26640 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
VARSP26640 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.17■□□□□ 0.66
VARSP26640 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
VARSP26640 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.17■□□□□ 0.66
VARSP26640 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.16■□□□□ 0.66
VARSP26640 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.16■□□□□ 0.66
VARSP26640 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.16■□□□□ 0.66
VARSP26640 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
VARSP26640 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.16■□□□□ 0.66
VARSP26640 AC128676.1-201ENST00000454392 318 ntBASIC19.16■□□□□ 0.66
VARSP26640 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.16■□□□□ 0.66
VARSP26640 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.16■□□□□ 0.66
VARSP26640 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.16■□□□□ 0.66
VARSP26640 AC006557.6-201ENST00000623071 864 ntBASIC19.16■□□□□ 0.66
VARSP26640 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARSP26640 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
VARSP26640 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VARSP26640 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
VARSP26640 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
VARSP26640 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 AC026366.1-201ENST00000488803 879 ntBASIC19.15■□□□□ 0.66
VARSP26640 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.15■□□□□ 0.66
VARSP26640 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.15■□□□□ 0.66
VARSP26640 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VARSP26640 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VARSP26640 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.15■□□□□ 0.66
VARSP26640 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.14■□□□□ 0.66
VARSP26640 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
VARSP26640 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
VARSP26640 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARSP26640 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARSP26640 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VARSP26640 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARSP26640 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.14■□□□□ 0.65
VARSP26640 AL390719.1-204ENST00000412397 1219 ntBASIC19.14■□□□□ 0.65
VARSP26640 UBE2SP1-201ENST00000450587 669 ntBASIC19.14■□□□□ 0.65
VARSP26640 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.14■□□□□ 0.65
VARSP26640 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.14■□□□□ 0.65
VARSP26640 AC005829.2-201ENST00000571422 1056 ntBASIC19.14■□□□□ 0.65
VARSP26640 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARSP26640 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
VARSP26640 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARSP26640 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.14■□□□□ 0.65
VARSP26640 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
VARSP26640 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARSP26640 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VARSP26640 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARSP26640 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARSP26640 AC092368.3-202ENST00000574180 1591 ntBASIC19.14■□□□□ 0.65
VARSP26640 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARSP26640 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.14■□□□□ 0.65
VARSP26640 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VARSP26640 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
VARSP26640 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VARSP26640 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms