Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.52■□□□□ 0.24
COL8A2P25067 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.52■□□□□ 0.24
COL8A2P25067 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.52■□□□□ 0.24
COL8A2P25067 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.52■□□□□ 0.24
COL8A2P25067 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL8A2P25067 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL8A2P25067 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.52■□□□□ 0.23
COL8A2P25067 KRT16P1-201ENST00000399124 1418 ntBASIC16.52■□□□□ 0.23
COL8A2P25067 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COL8A2P25067 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL8A2P25067 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COL8A2P25067 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
COL8A2P25067 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.51■□□□□ 0.23
COL8A2P25067 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.51■□□□□ 0.23
COL8A2P25067 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.51■□□□□ 0.23
COL8A2P25067 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
COL8A2P25067 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.51■□□□□ 0.23
COL8A2P25067 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.51■□□□□ 0.23
COL8A2P25067 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.51■□□□□ 0.23
COL8A2P25067 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
COL8A2P25067 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COL8A2P25067 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.51■□□□□ 0.23
COL8A2P25067 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.51■□□□□ 0.23
COL8A2P25067 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
COL8A2P25067 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.51■□□□□ 0.23
COL8A2P25067 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.51■□□□□ 0.23
COL8A2P25067 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.51■□□□□ 0.23
COL8A2P25067 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL8A2P25067 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
COL8A2P25067 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.5■□□□□ 0.23
COL8A2P25067 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL8A2P25067 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.5■□□□□ 0.23
COL8A2P25067 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL8A2P25067 AL691432.2-201ENST00000607222 2038 ntBASIC16.5■□□□□ 0.23
COL8A2P25067 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL8A2P25067 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL8A2P25067 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL8A2P25067 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
COL8A2P25067 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL8A2P25067 AC087499.1-201ENST00000418141 1075 ntBASIC16.5■□□□□ 0.23
COL8A2P25067 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL8A2P25067 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.5■□□□□ 0.23
COL8A2P25067 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.5■□□□□ 0.23
COL8A2P25067 REXO1L10P-201ENST00000615707 1290 ntBASIC16.5■□□□□ 0.23
COL8A2P25067 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.5■□□□□ 0.23
COL8A2P25067 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.5■□□□□ 0.23
COL8A2P25067 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL8A2P25067 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL8A2P25067 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.5■□□□□ 0.23
COL8A2P25067 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COL8A2P25067 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.5■□□□□ 0.23
COL8A2P25067 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL8A2P25067 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL8A2P25067 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL8A2P25067 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL8A2P25067 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL8A2P25067 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL8A2P25067 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
COL8A2P25067 TMEM179-206ENST00000616017 1645 ntBASIC16.49■□□□□ 0.23
COL8A2P25067 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.49■□□□□ 0.23
COL8A2P25067 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.49■□□□□ 0.23
COL8A2P25067 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL8A2P25067 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.49■□□□□ 0.23
COL8A2P25067 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL8A2P25067 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
COL8A2P25067 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL8A2P25067 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
COL8A2P25067 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL8A2P25067 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.49■□□□□ 0.23
COL8A2P25067 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.49■□□□□ 0.23
COL8A2P25067 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.49■□□□□ 0.23
COL8A2P25067 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.49■□□□□ 0.23
COL8A2P25067 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.49■□□□□ 0.23
COL8A2P25067 AC133561.5-201ENST00000635547 218 ntBASIC16.49■□□□□ 0.23
COL8A2P25067 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL8A2P25067 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
COL8A2P25067 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.49■□□□□ 0.23
COL8A2P25067 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL8A2P25067 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL8A2P25067 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL8A2P25067 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL8A2P25067 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.49■□□□□ 0.23
COL8A2P25067 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms