Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
NCLP19338 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCLP19338 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.17■■□□□ 1.3
NCLP19338 AC093503.3-201ENST00000624917 2352 ntBASIC23.17■■□□□ 1.3
NCLP19338 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCLP19338 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.17■■□□□ 1.3
NCLP19338 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.17■■□□□ 1.3
NCLP19338 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NCLP19338 AC006970.2-201ENST00000450065 779 ntBASIC23.17■■□□□ 1.3
NCLP19338 DUX4L16-201ENST00000555130 1264 ntBASIC23.17■■□□□ 1.3
NCLP19338 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.17■■□□□ 1.3
NCLP19338 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCLP19338 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
NCLP19338 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NCLP19338 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCLP19338 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NCLP19338 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCLP19338 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
NCLP19338 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NCLP19338 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NCLP19338 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCLP19338 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.16■■□□□ 1.3
NCLP19338 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
NCLP19338 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
NCLP19338 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NCLP19338 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCLP19338 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.16■■□□□ 1.3
NCLP19338 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.16■■□□□ 1.3
NCLP19338 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.16■■□□□ 1.3
NCLP19338 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
NCLP19338 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.16■■□□□ 1.3
NCLP19338 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCLP19338 TREX1-205ENST00000625293 1783 ntBASIC23.16■■□□□ 1.3
NCLP19338 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
NCLP19338 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
NCLP19338 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCLP19338 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NCLP19338 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.16■■□□□ 1.3
NCLP19338 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NCLP19338 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.15■■□□□ 1.3
NCLP19338 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.15■■□□□ 1.3
NCLP19338 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.15■■□□□ 1.3
NCLP19338 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NCLP19338 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
NCLP19338 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
NCLP19338 SLC7A5P1-201ENST00000568957 537 ntBASIC23.15■■□□□ 1.3
NCLP19338 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.15■■□□□ 1.3
NCLP19338 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.15■■□□□ 1.3
NCLP19338 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
NCLP19338 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
NCLP19338 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NCLP19338 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
NCLP19338 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NCLP19338 LETM1P2-201ENST00000597330 2178 ntBASIC23.14■■□□□ 1.3
NCLP19338 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC23.14■■□□□ 1.3
NCLP19338 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NCLP19338 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.14■■□□□ 1.3
NCLP19338 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NCLP19338 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NCLP19338 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
NCLP19338 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NCLP19338 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
NCLP19338 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
NCLP19338 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.14■■□□□ 1.29
NCLP19338 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NCLP19338 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.14■■□□□ 1.29
NCLP19338 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NCLP19338 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.14■■□□□ 1.29
NCLP19338 AC231657.2-201ENST00000624556 255 ntBASIC23.14■■□□□ 1.29
NCLP19338 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.14■■□□□ 1.29
NCLP19338 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.14■■□□□ 1.29
NCLP19338 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.14■■□□□ 1.29
NCLP19338 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
NCLP19338 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
NCLP19338 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NCLP19338 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
NCLP19338 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCLP19338 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NCLP19338 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCLP19338 MIR663A-201ENST00000385250 93 ntBASIC23.13■■□□□ 1.29
NCLP19338 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
NCLP19338 NCF1B-203ENST00000435988 1254 ntBASIC23.13■■□□□ 1.29
NCLP19338 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NCLP19338 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NCLP19338 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCLP19338 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
NCLP19338 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms