Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.46■□□□□ 0.55
NCK1P16333 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.46■□□□□ 0.55
NCK1P16333 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 AC010536.3-201ENST00000620306 533 ntBASIC18.46■□□□□ 0.55
NCK1P16333 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
NCK1P16333 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NCK1P16333 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.46■□□□□ 0.55
NCK1P16333 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NCK1P16333 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NCK1P16333 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.46■□□□□ 0.54
NCK1P16333 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
NCK1P16333 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
NCK1P16333 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCK1P16333 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCK1P16333 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.45■□□□□ 0.54
NCK1P16333 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.45■□□□□ 0.54
NCK1P16333 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
NCK1P16333 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NCK1P16333 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NCK1P16333 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NCK1P16333 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.45■□□□□ 0.54
NCK1P16333 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NCK1P16333 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.45■□□□□ 0.54
NCK1P16333 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.45■□□□□ 0.54
NCK1P16333 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.45■□□□□ 0.54
NCK1P16333 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NCK1P16333 AC009113.1-201ENST00000570267 2443 ntBASIC18.45■□□□□ 0.54
NCK1P16333 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NCK1P16333 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NCK1P16333 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
NCK1P16333 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NCK1P16333 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.45■□□□□ 0.54
NCK1P16333 AC005332.8-201ENST00000622750 2735 ntBASIC18.44■□□□□ 0.54
NCK1P16333 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.44■□□□□ 0.54
NCK1P16333 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.44■□□□□ 0.54
NCK1P16333 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
NCK1P16333 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.44■□□□□ 0.54
NCK1P16333 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.44■□□□□ 0.54
NCK1P16333 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.44■□□□□ 0.54
NCK1P16333 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
NCK1P16333 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NCK1P16333 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NCK1P16333 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NCK1P16333 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCK1P16333 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.44■□□□□ 0.54
NCK1P16333 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.43■□□□□ 0.54
NCK1P16333 AC006333.2-201ENST00000607957 2099 ntBASIC18.43■□□□□ 0.54
NCK1P16333 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NCK1P16333 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCK1P16333 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.43■□□□□ 0.54
NCK1P16333 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NCK1P16333 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
NCK1P16333 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
NCK1P16333 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCK1P16333 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCK1P16333 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCK1P16333 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.43■□□□□ 0.54
NCK1P16333 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.43■□□□□ 0.54
NCK1P16333 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCK1P16333 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCK1P16333 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.43■□□□□ 0.54
NCK1P16333 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NCK1P16333 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCK1P16333 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCK1P16333 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NCK1P16333 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCK1P16333 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCK1P16333 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NCK1P16333 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NCK1P16333 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCK1P16333 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.42■□□□□ 0.54
NCK1P16333 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCK1P16333 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NCK1P16333 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCK1P16333 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCK1P16333 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
NCK1P16333 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.42■□□□□ 0.54
NCK1P16333 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCK1P16333 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.42■□□□□ 0.54
NCK1P16333 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms