Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RARBP10826 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RARBP10826 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.95■■□□□ 1.1
RARBP10826 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RARBP10826 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.95■■□□□ 1.1
RARBP10826 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RARBP10826 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.95■■□□□ 1.1
RARBP10826 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RARBP10826 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RARBP10826 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RARBP10826 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RARBP10826 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
RARBP10826 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.94■■□□□ 1.1
RARBP10826 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.94■■□□□ 1.1
RARBP10826 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.94■■□□□ 1.1
RARBP10826 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.94■■□□□ 1.1
RARBP10826 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RARBP10826 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RARBP10826 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
RARBP10826 AC092720.2-201ENST00000602388 1665 ntBASIC21.94■■□□□ 1.1
RARBP10826 AC006128.1-201ENST00000624704 1661 ntBASIC21.94■■□□□ 1.1
RARBP10826 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RARBP10826 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.94■■□□□ 1.1
RARBP10826 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RARBP10826 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RARBP10826 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RARBP10826 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.93■■□□□ 1.1
RARBP10826 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RARBP10826 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.93■■□□□ 1.1
RARBP10826 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.93■■□□□ 1.1
RARBP10826 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
RARBP10826 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RARBP10826 AC092338.2-201ENST00000568827 1415 ntBASIC21.93■■□□□ 1.1
RARBP10826 AC141257.4-201ENST00000634557 245 ntBASIC21.93■■□□□ 1.1
RARBP10826 AC136944.6-201ENST00000634818 245 ntBASIC21.93■■□□□ 1.1
RARBP10826 AP000550.4-202ENST00000639755 178 ntBASIC21.93■■□□□ 1.1
RARBP10826 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
RARBP10826 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARBP10826 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARBP10826 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.92■■□□□ 1.1
RARBP10826 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARBP10826 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.92■■□□□ 1.1
RARBP10826 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RARBP10826 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RARBP10826 KRT18P56-201ENST00000507275 550 ntBASIC21.92■■□□□ 1.1
RARBP10826 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.92■■□□□ 1.1
RARBP10826 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.92■■□□□ 1.1
RARBP10826 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.92■■□□□ 1.1
RARBP10826 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.92■■□□□ 1.1
RARBP10826 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARBP10826 AC007225.1-201ENST00000566331 1836 ntBASIC21.92■■□□□ 1.1
RARBP10826 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARBP10826 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.91■■□□□ 1.1
RARBP10826 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RARBP10826 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RARBP10826 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RARBP10826 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.91■■□□□ 1.1
RARBP10826 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.91■■□□□ 1.1
RARBP10826 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
RARBP10826 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.91■■□□□ 1.1
RARBP10826 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RARBP10826 TSPY17P-201ENST00000450329 467 ntBASIC21.91■■□□□ 1.1
RARBP10826 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.91■■□□□ 1.1
RARBP10826 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.91■■□□□ 1.1
RARBP10826 AL512604.3-201ENST00000569583 964 ntBASIC21.91■■□□□ 1.1
RARBP10826 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.91■■□□□ 1.1
RARBP10826 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
RARBP10826 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RARBP10826 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARBP10826 SLC25A24-204ENST00000569674 2357 ntBASIC21.9■■□□□ 1.1
RARBP10826 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.9■■□□□ 1.1
RARBP10826 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARBP10826 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARBP10826 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.9■■□□□ 1.1
RARBP10826 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RARBP10826 Z85996.1-201ENST00000494644 937 ntBASIC21.9■■□□□ 1.1
RARBP10826 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.9■■□□□ 1.1
RARBP10826 AC011558.1-201ENST00000623459 338 ntBASIC21.9■■□□□ 1.1
RARBP10826 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.9■■□□□ 1.1
RARBP10826 AL031432.5-201ENST00000641059 760 ntBASIC21.9■■□□□ 1.1
RARBP10826 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
RARBP10826 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARBP10826 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARBP10826 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RARBP10826 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RARBP10826 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
RARBP10826 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RARBP10826 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RARBP10826 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RARBP10826 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.89■■□□□ 1.1
RARBP10826 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.89■■□□□ 1.1
RARBP10826 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.89■■□□□ 1.1
RARBP10826 TMEM179-206ENST00000616017 1645 ntBASIC21.89■■□□□ 1.09
RARBP10826 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RARBP10826 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.89■■□□□ 1.09
RARBP10826 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RARBP10826 AC009947.2-201ENST00000444014 672 ntBASIC21.89■■□□□ 1.09
RARBP10826 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RARBP10826 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.89■■□□□ 1.09
RARBP10826 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms