Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LINGO3P0C6S8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINGO3P0C6S8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.86■□□□□ 0.61
LINGO3P0C6S8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LINGO3P0C6S8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.85■□□□□ 0.61
LINGO3P0C6S8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
LINGO3P0C6S8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 AC116050.2-201ENST00000612102 1779 ntBASIC18.84■□□□□ 0.61
LINGO3P0C6S8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 TERF1P5-201ENST00000477545 1207 ntBASIC18.84■□□□□ 0.61
LINGO3P0C6S8 DUX4L16-201ENST00000555130 1264 ntBASIC18.84■□□□□ 0.61
LINGO3P0C6S8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 AC092666.2-201ENST00000613287 246 ntBASIC18.84■□□□□ 0.61
LINGO3P0C6S8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINGO3P0C6S8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
LINGO3P0C6S8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINGO3P0C6S8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 AC004911.1-201ENST00000416316 871 ntBASIC18.83■□□□□ 0.6
LINGO3P0C6S8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.83■□□□□ 0.6
LINGO3P0C6S8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 AC009053.2-201ENST00000563701 2365 ntBASIC18.82■□□□□ 0.6
LINGO3P0C6S8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LINGO3P0C6S8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms