Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 MIR4758-201ENST00000577688 71 ntBASIC17.81■□□□□ 0.44
HIST1H2ABP04908 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HIST1H2ABP04908 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 AC092118.2-201ENST00000613495 667 ntBASIC17.8■□□□□ 0.44
HIST1H2ABP04908 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HIST1H2ABP04908 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 NCF1B-203ENST00000435988 1254 ntBASIC17.79■□□□□ 0.44
HIST1H2ABP04908 AC097658.1-201ENST00000475555 843 ntBASIC17.79■□□□□ 0.44
HIST1H2ABP04908 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 TREX1-205ENST00000625293 1783 ntBASIC17.79■□□□□ 0.44
HIST1H2ABP04908 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HIST1H2ABP04908 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 AC005829.2-201ENST00000571422 1056 ntBASIC17.78■□□□□ 0.44
HIST1H2ABP04908 AC092666.2-201ENST00000613287 246 ntBASIC17.78■□□□□ 0.44
HIST1H2ABP04908 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 AC116562.4-201ENST00000641316 2276 ntBASIC17.78■□□□□ 0.44
HIST1H2ABP04908 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.78■□□□□ 0.44
HIST1H2ABP04908 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 AC018553.1-201ENST00000616682 1458 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms