Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 CDCA4P2-201ENST00000441182 718 ntBASIC17.54■□□□□ 0.4
HLA-DPB1P04440 AC007322.4-201ENST00000509611 723 ntBASIC17.54■□□□□ 0.4
HLA-DPB1P04440 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 AC016405.3-201ENST00000607710 860 ntBASIC17.54■□□□□ 0.4
HLA-DPB1P04440 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DPB1P04440 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 AC005082.1-201ENST00000413042 2259 ntBASIC17.53■□□□□ 0.4
HLA-DPB1P04440 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
HLA-DPB1P04440 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HLA-DPB1P04440 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
HLA-DPB1P04440 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
HLA-DPB1P04440 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DPB1P04440 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HLA-DPB1P04440 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DPB1P04440 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms