Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD3DP04234 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.58■□□□□ 0.24
CD3DP04234 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.58■□□□□ 0.24
CD3DP04234 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.58■□□□□ 0.24
CD3DP04234 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.58■□□□□ 0.24
CD3DP04234 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.58■□□□□ 0.24
CD3DP04234 MIR6084-201ENST00000622012 110 ntBASIC16.58■□□□□ 0.24
CD3DP04234 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD3DP04234 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD3DP04234 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD3DP04234 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD3DP04234 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CD3DP04234 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD3DP04234 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.58■□□□□ 0.24
CD3DP04234 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.58■□□□□ 0.24
CD3DP04234 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CD3DP04234 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD3DP04234 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CD3DP04234 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CD3DP04234 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD3DP04234 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD3DP04234 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD3DP04234 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD3DP04234 PCDHB18P-201ENST00000524813 2368 ntBASIC16.57■□□□□ 0.24
CD3DP04234 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CD3DP04234 AC090164.3-201ENST00000610780 2143 ntBASIC16.57■□□□□ 0.24
CD3DP04234 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD3DP04234 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD3DP04234 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.57■□□□□ 0.24
CD3DP04234 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD3DP04234 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD3DP04234 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD3DP04234 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD3DP04234 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD3DP04234 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CD3DP04234 EDA-201ENST00000338901 1233 ntBASIC16.57■□□□□ 0.24
CD3DP04234 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.57■□□□□ 0.24
CD3DP04234 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CD3DP04234 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.57■□□□□ 0.24
CD3DP04234 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD3DP04234 WIZP1-201ENST00000531444 2299 ntBASIC16.57■□□□□ 0.24
CD3DP04234 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD3DP04234 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD3DP04234 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.56■□□□□ 0.24
CD3DP04234 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.56■□□□□ 0.24
CD3DP04234 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CD3DP04234 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 MIR939-201ENST00000401314 82 ntBASIC16.56■□□□□ 0.24
CD3DP04234 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.56■□□□□ 0.24
CD3DP04234 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.56■□□□□ 0.24
CD3DP04234 AC091305.1-201ENST00000479476 895 ntBASIC16.56■□□□□ 0.24
CD3DP04234 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.56■□□□□ 0.24
CD3DP04234 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.56■□□□□ 0.24
CD3DP04234 AF213884.3-201ENST00000563833 479 ntBASIC16.56■□□□□ 0.24
CD3DP04234 AL031963.3-201ENST00000606441 850 ntBASIC16.56■□□□□ 0.24
CD3DP04234 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CD3DP04234 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD3DP04234 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CD3DP04234 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.55■□□□□ 0.24
CD3DP04234 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CD3DP04234 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CD3DP04234 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CD3DP04234 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CD3DP04234 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CD3DP04234 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.55■□□□□ 0.24
CD3DP04234 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.55■□□□□ 0.24
CD3DP04234 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.55■□□□□ 0.24
CD3DP04234 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.55■□□□□ 0.24
CD3DP04234 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 HCG11-201ENST00000411553 5696 ntBASIC16.55■□□□□ 0.24
CD3DP04234 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD3DP04234 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms