Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC23.62■■□□□ 1.37
COL1A1P02452 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.62■■□□□ 1.37
COL1A1P02452 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.62■■□□□ 1.37
COL1A1P02452 AC011298.2-201ENST00000617989 482 ntBASIC23.62■■□□□ 1.37
COL1A1P02452 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.62■■□□□ 1.37
COL1A1P02452 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A1P02452 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
COL1A1P02452 LGALS8-AS1-201ENST00000487567 1457 ntBASIC23.61■■□□□ 1.37
COL1A1P02452 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
COL1A1P02452 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A1P02452 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.61■■□□□ 1.37
COL1A1P02452 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A1P02452 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A1P02452 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A1P02452 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A1P02452 TSPY14P-201ENST00000303979 915 ntBASIC23.61■■□□□ 1.37
COL1A1P02452 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.61■■□□□ 1.37
COL1A1P02452 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL1A1P02452 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A1P02452 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
COL1A1P02452 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A1P02452 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A1P02452 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.6■■□□□ 1.37
COL1A1P02452 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A1P02452 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A1P02452 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
COL1A1P02452 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
COL1A1P02452 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
COL1A1P02452 AC091390.4-202ENST00000476426 537 ntBASIC23.6■■□□□ 1.37
COL1A1P02452 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
COL1A1P02452 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
COL1A1P02452 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A1P02452 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
COL1A1P02452 AC096733.2-201ENST00000609937 1394 ntBASIC23.6■■□□□ 1.37
COL1A1P02452 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
COL1A1P02452 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
COL1A1P02452 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A1P02452 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A1P02452 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A1P02452 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
COL1A1P02452 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A1P02452 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A1P02452 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A1P02452 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A1P02452 AC104076.2-201ENST00000448912 469 ntBASIC23.59■■□□□ 1.37
COL1A1P02452 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
COL1A1P02452 EGLN1P1-201ENST00000531623 762 ntBASIC23.59■■□□□ 1.37
COL1A1P02452 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.59■■□□□ 1.37
COL1A1P02452 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.59■■□□□ 1.37
COL1A1P02452 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.59■■□□□ 1.37
COL1A1P02452 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.59■■□□□ 1.37
COL1A1P02452 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.59■■□□□ 1.37
COL1A1P02452 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A1P02452 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A1P02452 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.59■■□□□ 1.37
COL1A1P02452 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL1A1P02452 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.58■■□□□ 1.37
COL1A1P02452 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.37
COL1A1P02452 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.58■■□□□ 1.37
COL1A1P02452 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL1A1P02452 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL1A1P02452 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.58■■□□□ 1.37
COL1A1P02452 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.58■■□□□ 1.37
COL1A1P02452 AC097488.1-201ENST00000507834 756 ntBASIC23.58■■□□□ 1.37
COL1A1P02452 AP000692.2-201ENST00000608391 879 ntBASIC23.58■■□□□ 1.37
COL1A1P02452 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.36
COL1A1P02452 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.58■■□□□ 1.36
COL1A1P02452 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
COL1A1P02452 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
COL1A1P02452 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.58■■□□□ 1.36
COL1A1P02452 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.57■■□□□ 1.36
COL1A1P02452 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL1A1P02452 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL1A1P02452 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
COL1A1P02452 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
COL1A1P02452 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL1A1P02452 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL1A1P02452 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.57■■□□□ 1.36
COL1A1P02452 AC004951.3-201ENST00000418645 1148 ntBASIC23.57■■□□□ 1.36
COL1A1P02452 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.57■■□□□ 1.36
COL1A1P02452 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.57■■□□□ 1.36
COL1A1P02452 AC087388.1-201ENST00000571370 1112 ntBASIC23.57■■□□□ 1.36
COL1A1P02452 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.57■■□□□ 1.36
COL1A1P02452 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.57■■□□□ 1.36
COL1A1P02452 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.57■■□□□ 1.36
COL1A1P02452 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
COL1A1P02452 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
COL1A1P02452 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC23.56■■□□□ 1.36
COL1A1P02452 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
COL1A1P02452 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL1A1P02452 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC23.56■■□□□ 1.36
COL1A1P02452 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL1A1P02452 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
COL1A1P02452 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.56■■□□□ 1.36
COL1A1P02452 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL1A1P02452 WWOX-216ENST00000569818 525 ntBASIC23.56■■□□□ 1.36
COL1A1P02452 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
COL1A1P02452 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.56■■□□□ 1.36
COL1A1P02452 FAM87A-204ENST00000613235 858 ntBASIC23.56■■□□□ 1.36
COL1A1P02452 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms