Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.48■□□□□ 0.07
IFNA1P01562 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.48■□□□□ 0.07
IFNA1P01562 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.48■□□□□ 0.07
IFNA1P01562 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.48■□□□□ 0.07
IFNA1P01562 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.48■□□□□ 0.07
IFNA1P01562 AC053503.5-201ENST00000601508 636 ntBASIC15.48■□□□□ 0.07
IFNA1P01562 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.48■□□□□ 0.07
IFNA1P01562 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.48■□□□□ 0.07
IFNA1P01562 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 KRT8P36-201ENST00000489121 1440 ntBASIC15.48■□□□□ 0.07
IFNA1P01562 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.48■□□□□ 0.07
IFNA1P01562 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
IFNA1P01562 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
IFNA1P01562 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
IFNA1P01562 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
IFNA1P01562 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
IFNA1P01562 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
IFNA1P01562 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.47■□□□□ 0.07
IFNA1P01562 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
IFNA1P01562 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IFNA1P01562 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IFNA1P01562 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.47■□□□□ 0.07
IFNA1P01562 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
IFNA1P01562 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.47■□□□□ 0.07
IFNA1P01562 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.47■□□□□ 0.07
IFNA1P01562 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.47■□□□□ 0.07
IFNA1P01562 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
IFNA1P01562 SLC47A1P1-202ENST00000449666 945 ntBASIC15.47■□□□□ 0.07
IFNA1P01562 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.47■□□□□ 0.07
IFNA1P01562 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.47■□□□□ 0.07
IFNA1P01562 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 AC008175.2-201ENST00000612840 297 ntBASIC15.47■□□□□ 0.07
IFNA1P01562 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
IFNA1P01562 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.47■□□□□ 0.07
IFNA1P01562 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IFNA1P01562 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
IFNA1P01562 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
IFNA1P01562 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
IFNA1P01562 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
IFNA1P01562 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
IFNA1P01562 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
IFNA1P01562 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
IFNA1P01562 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
IFNA1P01562 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.46■□□□□ 0.07
IFNA1P01562 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
IFNA1P01562 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
IFNA1P01562 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
IFNA1P01562 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.46■□□□□ 0.07
IFNA1P01562 AL138724.1-201ENST00000606771 1088 ntBASIC15.46■□□□□ 0.07
IFNA1P01562 AC005224.4-201ENST00000583262 1652 ntBASIC15.46■□□□□ 0.07
IFNA1P01562 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.46■□□□□ 0.07
IFNA1P01562 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
IFNA1P01562 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.46■□□□□ 0.07
IFNA1P01562 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
IFNA1P01562 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.46■□□□□ 0.06
IFNA1P01562 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.46■□□□□ 0.06
IFNA1P01562 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.46■□□□□ 0.06
IFNA1P01562 AP000997.3-201ENST00000623333 2250 ntBASIC15.46■□□□□ 0.06
IFNA1P01562 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
IFNA1P01562 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.46■□□□□ 0.06
IFNA1P01562 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms