Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDGFBP01127 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
PDGFBP01127 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PDGFBP01127 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFBP01127 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFBP01127 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFBP01127 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.71■□□□□ 0.75
PDGFBP01127 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFBP01127 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.71■□□□□ 0.75
PDGFBP01127 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.71■□□□□ 0.75
PDGFBP01127 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFBP01127 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PDGFBP01127 TSSC2-201ENST00000450217 709 ntBASIC19.71■□□□□ 0.75
PDGFBP01127 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.71■□□□□ 0.75
PDGFBP01127 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFBP01127 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.71■□□□□ 0.75
PDGFBP01127 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.71■□□□□ 0.75
PDGFBP01127 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFBP01127 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PDGFBP01127 AC104692.2-201ENST00000603054 253 ntBASIC19.71■□□□□ 0.75
PDGFBP01127 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.71■□□□□ 0.75
PDGFBP01127 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDGFBP01127 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PDGFBP01127 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.71■□□□□ 0.75
PDGFBP01127 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PDGFBP01127 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFBP01127 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDGFBP01127 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.7■□□□□ 0.74
PDGFBP01127 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PDGFBP01127 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 HBZP1-201ENST00000354915 429 ntBASIC19.7■□□□□ 0.74
PDGFBP01127 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.7■□□□□ 0.74
PDGFBP01127 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PDGFBP01127 AC079781.3-201ENST00000449110 356 ntBASIC19.7■□□□□ 0.74
PDGFBP01127 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.7■□□□□ 0.74
PDGFBP01127 AL732292.2-201ENST00000609649 430 ntBASIC19.7■□□□□ 0.74
PDGFBP01127 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PDGFBP01127 DPP3P2-201ENST00000416030 1696 ntBASIC19.7■□□□□ 0.74
PDGFBP01127 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.7■□□□□ 0.74
PDGFBP01127 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PDGFBP01127 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDGFBP01127 AC016734.2-201ENST00000624325 1377 ntBASIC19.7■□□□□ 0.74
PDGFBP01127 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.69■□□□□ 0.74
PDGFBP01127 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFBP01127 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
PDGFBP01127 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFBP01127 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFBP01127 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PDGFBP01127 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFBP01127 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFBP01127 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFBP01127 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFBP01127 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFBP01127 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.69■□□□□ 0.74
PDGFBP01127 AP002383.4-201ENST00000442518 975 ntBASIC19.69■□□□□ 0.74
PDGFBP01127 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.69■□□□□ 0.74
PDGFBP01127 AC092597.1-201ENST00000487352 616 ntBASIC19.69■□□□□ 0.74
PDGFBP01127 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.69■□□□□ 0.74
PDGFBP01127 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.69■□□□□ 0.74
PDGFBP01127 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.69■□□□□ 0.74
PDGFBP01127 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
PDGFBP01127 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFBP01127 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFBP01127 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.69■□□□□ 0.74
PDGFBP01127 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PDGFBP01127 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PDGFBP01127 KRT16P6-202ENST00000425692 1426 ntBASIC19.68■□□□□ 0.74
PDGFBP01127 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFBP01127 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFBP01127 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.68■□□□□ 0.74
PDGFBP01127 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFBP01127 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PDGFBP01127 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFBP01127 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFBP01127 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.68■□□□□ 0.74
PDGFBP01127 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFBP01127 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.68■□□□□ 0.74
PDGFBP01127 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFBP01127 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFBP01127 LINC01465-201ENST00000408887 1940 ntBASIC19.68■□□□□ 0.74
PDGFBP01127 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFBP01127 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.68■□□□□ 0.74
PDGFBP01127 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.68■□□□□ 0.74
PDGFBP01127 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDGFBP01127 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFBP01127 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFBP01127 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFBP01127 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDGFBP01127 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms