Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.1■□□□□ 0.65
SIX3O95343 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.1■□□□□ 0.65
SIX3O95343 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.1■□□□□ 0.65
SIX3O95343 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX3O95343 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX3O95343 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX3O95343 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIX3O95343 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.1■□□□□ 0.65
SIX3O95343 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX3O95343 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX3O95343 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SIX3O95343 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SIX3O95343 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SIX3O95343 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SIX3O95343 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.09■□□□□ 0.65
SIX3O95343 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SIX3O95343 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX3O95343 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX3O95343 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.09■□□□□ 0.65
SIX3O95343 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIX3O95343 NCF1B-203ENST00000435988 1254 ntBASIC19.09■□□□□ 0.65
SIX3O95343 TSPY6P-201ENST00000448518 926 ntBASIC19.09■□□□□ 0.65
SIX3O95343 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.09■□□□□ 0.65
SIX3O95343 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIX3O95343 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX3O95343 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.09■□□□□ 0.65
SIX3O95343 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX3O95343 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX3O95343 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.08■□□□□ 0.65
SIX3O95343 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SIX3O95343 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX3O95343 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.08■□□□□ 0.65
SIX3O95343 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.08■□□□□ 0.65
SIX3O95343 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX3O95343 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX3O95343 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.08■□□□□ 0.64
SIX3O95343 SLC29A4P1-201ENST00000398760 971 ntBASIC19.08■□□□□ 0.64
SIX3O95343 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.08■□□□□ 0.64
SIX3O95343 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIX3O95343 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.08■□□□□ 0.64
SIX3O95343 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.08■□□□□ 0.64
SIX3O95343 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX3O95343 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX3O95343 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX3O95343 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SIX3O95343 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SIX3O95343 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX3O95343 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX3O95343 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SIX3O95343 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.08■□□□□ 0.64
SIX3O95343 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX3O95343 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SIX3O95343 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX3O95343 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX3O95343 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX3O95343 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX3O95343 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SIX3O95343 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX3O95343 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX3O95343 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.07■□□□□ 0.64
SIX3O95343 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.07■□□□□ 0.64
SIX3O95343 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX3O95343 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.07■□□□□ 0.64
SIX3O95343 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX3O95343 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX3O95343 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX3O95343 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX3O95343 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX3O95343 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX3O95343 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX3O95343 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX3O95343 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX3O95343 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX3O95343 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SIX3O95343 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX3O95343 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX3O95343 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.06■□□□□ 0.64
SIX3O95343 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SIX3O95343 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX3O95343 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX3O95343 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX3O95343 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SIX3O95343 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIX3O95343 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SIX3O95343 AC098934.4-201ENST00000564127 592 ntBASIC19.06■□□□□ 0.64
SIX3O95343 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX3O95343 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX3O95343 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX3O95343 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX3O95343 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SIX3O95343 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.06■□□□□ 0.64
SIX3O95343 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX3O95343 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX3O95343 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX3O95343 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.05■□□□□ 0.64
SIX3O95343 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX3O95343 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX3O95343 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SIX3O95343 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SIX3O95343 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms