Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AC135050.7-201ENST00000624508 2218 ntBASIC17.41■□□□□ 0.38
CDRT1O95170 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDRT1O95170 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDRT1O95170 AL133373.2-201ENST00000623187 2828 ntBASIC17.41■□□□□ 0.38
CDRT1O95170 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.41■□□□□ 0.38
CDRT1O95170 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDRT1O95170 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDRT1O95170 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDRT1O95170 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.41■□□□□ 0.38
CDRT1O95170 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.41■□□□□ 0.38
CDRT1O95170 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDRT1O95170 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDRT1O95170 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDRT1O95170 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDRT1O95170 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDRT1O95170 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDRT1O95170 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDRT1O95170 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDRT1O95170 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.4■□□□□ 0.38
CDRT1O95170 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDRT1O95170 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDRT1O95170 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDRT1O95170 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.4■□□□□ 0.38
CDRT1O95170 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.4■□□□□ 0.38
CDRT1O95170 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.4■□□□□ 0.38
CDRT1O95170 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.4■□□□□ 0.38
CDRT1O95170 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDRT1O95170 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.4■□□□□ 0.38
CDRT1O95170 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDRT1O95170 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDRT1O95170 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
CDRT1O95170 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDRT1O95170 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDRT1O95170 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDRT1O95170 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDRT1O95170 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDRT1O95170 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CDRT1O95170 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.39■□□□□ 0.38
CDRT1O95170 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDRT1O95170 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.39■□□□□ 0.37
CDRT1O95170 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.39■□□□□ 0.37
CDRT1O95170 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.39■□□□□ 0.37
CDRT1O95170 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.39■□□□□ 0.37
CDRT1O95170 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDRT1O95170 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.39■□□□□ 0.37
CDRT1O95170 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.39■□□□□ 0.37
CDRT1O95170 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.39■□□□□ 0.37
CDRT1O95170 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
CDRT1O95170 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDRT1O95170 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDRT1O95170 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDRT1O95170 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.38■□□□□ 0.37
CDRT1O95170 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDRT1O95170 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDRT1O95170 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.38■□□□□ 0.37
CDRT1O95170 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.38■□□□□ 0.37
CDRT1O95170 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDRT1O95170 FAM21FP-204ENST00000608637 956 ntBASIC17.38■□□□□ 0.37
CDRT1O95170 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDRT1O95170 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.38■□□□□ 0.37
CDRT1O95170 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms