Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CNOT3O75175 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.92■□□□□ 0.62
CNOT3O75175 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CNOT3O75175 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CNOT3O75175 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CNOT3O75175 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CNOT3O75175 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CNOT3O75175 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CNOT3O75175 AC124283.5-201ENST00000624661 1809 ntBASIC18.91■□□□□ 0.62
CNOT3O75175 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
CNOT3O75175 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.91■□□□□ 0.62
CNOT3O75175 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 AC023632.3-201ENST00000521633 145 ntBASIC18.91■□□□□ 0.62
CNOT3O75175 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.91■□□□□ 0.62
CNOT3O75175 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 Z99916.2-201ENST00000604037 246 ntBASIC18.91■□□□□ 0.62
CNOT3O75175 AC124016.1-201ENST00000609552 612 ntBASIC18.91■□□□□ 0.62
CNOT3O75175 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CNOT3O75175 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
CNOT3O75175 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 PTBP1P-201ENST00000554374 1601 ntBASIC18.91■□□□□ 0.62
CNOT3O75175 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CNOT3O75175 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
CNOT3O75175 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.91■□□□□ 0.62
CNOT3O75175 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CNOT3O75175 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CNOT3O75175 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT3O75175 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT3O75175 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CNOT3O75175 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CNOT3O75175 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT3O75175 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT3O75175 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT3O75175 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT3O75175 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.9■□□□□ 0.62
CNOT3O75175 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CNOT3O75175 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CNOT3O75175 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.9■□□□□ 0.62
CNOT3O75175 BX323043.1-201ENST00000641006 1765 ntBASIC18.9■□□□□ 0.62
CNOT3O75175 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT3O75175 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT3O75175 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNOT3O75175 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNOT3O75175 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNOT3O75175 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNOT3O75175 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.89■□□□□ 0.62
CNOT3O75175 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CNOT3O75175 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.89■□□□□ 0.61
CNOT3O75175 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT3O75175 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT3O75175 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT3O75175 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT3O75175 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT3O75175 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT3O75175 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT3O75175 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT3O75175 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CNOT3O75175 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNOT3O75175 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CNOT3O75175 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.89■□□□□ 0.61
CNOT3O75175 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.89■□□□□ 0.61
CNOT3O75175 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CNOT3O75175 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.89■□□□□ 0.61
CNOT3O75175 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.89■□□□□ 0.61
CNOT3O75175 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
CNOT3O75175 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CNOT3O75175 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT3O75175 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms