Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.74■□□□□ 0.59
CPNE3O75131 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.74■□□□□ 0.59
CPNE3O75131 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CPNE3O75131 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE3O75131 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE3O75131 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE3O75131 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CPNE3O75131 AC116351.2-201ENST00000606540 1585 ntBASIC18.74■□□□□ 0.59
CPNE3O75131 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.74■□□□□ 0.59
CPNE3O75131 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CPNE3O75131 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE3O75131 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CPNE3O75131 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE3O75131 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE3O75131 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE3O75131 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPNE3O75131 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.74■□□□□ 0.59
CPNE3O75131 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE3O75131 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE3O75131 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE3O75131 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CPNE3O75131 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE3O75131 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE3O75131 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE3O75131 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE3O75131 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE3O75131 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CPNE3O75131 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.73■□□□□ 0.59
CPNE3O75131 AC087499.1-201ENST00000418141 1075 ntBASIC18.73■□□□□ 0.59
CPNE3O75131 TSPY15P-201ENST00000457163 923 ntBASIC18.73■□□□□ 0.59
CPNE3O75131 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE3O75131 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CPNE3O75131 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.73■□□□□ 0.59
CPNE3O75131 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE3O75131 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE3O75131 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE3O75131 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE3O75131 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CPNE3O75131 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE3O75131 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE3O75131 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE3O75131 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CPNE3O75131 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE3O75131 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE3O75131 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE3O75131 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE3O75131 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE3O75131 NIFKP9-201ENST00000419265 221 ntBASIC18.72■□□□□ 0.59
CPNE3O75131 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.72■□□□□ 0.59
CPNE3O75131 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.72■□□□□ 0.59
CPNE3O75131 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE3O75131 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE3O75131 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE3O75131 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.72■□□□□ 0.59
CPNE3O75131 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE3O75131 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.72■□□□□ 0.59
CPNE3O75131 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE3O75131 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE3O75131 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
CPNE3O75131 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.72■□□□□ 0.59
CPNE3O75131 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CPNE3O75131 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.71■□□□□ 0.59
CPNE3O75131 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 KSR1P1-201ENST00000446298 240 ntBASIC18.71■□□□□ 0.59
CPNE3O75131 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 NUDT16P1-203ENST00000513809 620 ntBASIC18.71■□□□□ 0.59
CPNE3O75131 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.71■□□□□ 0.59
CPNE3O75131 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.71■□□□□ 0.59
CPNE3O75131 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.71■□□□□ 0.59
CPNE3O75131 AC133561.5-201ENST00000635547 218 ntBASIC18.71■□□□□ 0.59
CPNE3O75131 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.71■□□□□ 0.59
CPNE3O75131 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.71■□□□□ 0.59
CPNE3O75131 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.71■□□□□ 0.59
CPNE3O75131 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE3O75131 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
CPNE3O75131 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE3O75131 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE3O75131 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE3O75131 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE3O75131 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.7■□□□□ 0.58
CPNE3O75131 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE3O75131 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.7■□□□□ 0.58
CPNE3O75131 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CPNE3O75131 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE3O75131 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE3O75131 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE3O75131 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms