Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
FOXD2O60548 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.67■□□□□ 0.74
FOXD2O60548 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.67■□□□□ 0.74
FOXD2O60548 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
FOXD2O60548 MYC-208ENST00000641036 567 ntBASIC19.67■□□□□ 0.74
FOXD2O60548 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXD2O60548 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXD2O60548 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXD2O60548 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD2O60548 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD2O60548 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD2O60548 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD2O60548 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
FOXD2O60548 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
FOXD2O60548 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD2O60548 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD2O60548 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXD2O60548 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
FOXD2O60548 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXD2O60548 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXD2O60548 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.66■□□□□ 0.74
FOXD2O60548 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.66■□□□□ 0.74
FOXD2O60548 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.66■□□□□ 0.74
FOXD2O60548 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXD2O60548 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
FOXD2O60548 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXD2O60548 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXD2O60548 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
FOXD2O60548 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXD2O60548 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
FOXD2O60548 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXD2O60548 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXD2O60548 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
FOXD2O60548 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXD2O60548 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXD2O60548 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FOXD2O60548 HMGA1P5-201ENST00000412453 271 ntBASIC19.65■□□□□ 0.74
FOXD2O60548 AL450487.1-201ENST00000426799 995 ntBASIC19.65■□□□□ 0.74
FOXD2O60548 FAM207BP-201ENST00000447172 505 ntBASIC19.65■□□□□ 0.74
FOXD2O60548 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.65■□□□□ 0.74
FOXD2O60548 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXD2O60548 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXD2O60548 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXD2O60548 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXD2O60548 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXD2O60548 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXD2O60548 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.65■□□□□ 0.74
FOXD2O60548 AL121894.2-201ENST00000602977 491 ntBASIC19.65■□□□□ 0.74
FOXD2O60548 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXD2O60548 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.65■□□□□ 0.74
FOXD2O60548 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
FOXD2O60548 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
FOXD2O60548 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXD2O60548 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXD2O60548 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
FOXD2O60548 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FOXD2O60548 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FOXD2O60548 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
FOXD2O60548 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
FOXD2O60548 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD2O60548 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.64■□□□□ 0.73
FOXD2O60548 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXD2O60548 ECEL1P2-202ENST00000465689 757 ntBASIC19.64■□□□□ 0.73
FOXD2O60548 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.64■□□□□ 0.73
FOXD2O60548 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
FOXD2O60548 AL691432.3-201ENST00000621860 400 ntBASIC19.64■□□□□ 0.73
FOXD2O60548 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXD2O60548 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD2O60548 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXD2O60548 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD2O60548 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD2O60548 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.64■□□□□ 0.73
FOXD2O60548 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD2O60548 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
FOXD2O60548 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXD2O60548 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXD2O60548 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXD2O60548 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXD2O60548 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXD2O60548 PCDHAC2-203ENST00000615316 3011 ntBASIC19.63■□□□□ 0.73
FOXD2O60548 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
FOXD2O60548 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
FOXD2O60548 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.63■□□□□ 0.73
FOXD2O60548 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD2O60548 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD2O60548 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD2O60548 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD2O60548 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD2O60548 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD2O60548 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD2O60548 AL031133.1-201ENST00000406807 723 ntBASIC19.63■□□□□ 0.73
FOXD2O60548 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.63■□□□□ 0.73
FOXD2O60548 AC092647.4-201ENST00000457211 535 ntBASIC19.63■□□□□ 0.73
FOXD2O60548 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.63■□□□□ 0.73
FOXD2O60548 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXD2O60548 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD2O60548 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
FOXD2O60548 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXD2O60548 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.63■□□□□ 0.73
FOXD2O60548 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms