Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MSH5O43196 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MSH5O43196 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC26.36■■□□□ 1.81
MSH5O43196 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC26.36■■□□□ 1.81
MSH5O43196 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MSH5O43196 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
MSH5O43196 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MSH5O43196 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC26.36■■□□□ 1.81
MSH5O43196 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
MSH5O43196 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
MSH5O43196 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.36■■□□□ 1.81
MSH5O43196 HMGB1P8-201ENST00000558211 949 ntBASIC26.36■■□□□ 1.81
MSH5O43196 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC26.36■■□□□ 1.81
MSH5O43196 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
MSH5O43196 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MSH5O43196 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
MSH5O43196 SMG8-203ENST00000578922 2178 ntBASIC26.36■■□□□ 1.81
MSH5O43196 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
MSH5O43196 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.35■■□□□ 1.81
MSH5O43196 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
MSH5O43196 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
MSH5O43196 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
MSH5O43196 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
MSH5O43196 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
MSH5O43196 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
MSH5O43196 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
MSH5O43196 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
MSH5O43196 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
MSH5O43196 AC093534.1-201ENST00000504977 132 ntBASIC26.35■■□□□ 1.81
MSH5O43196 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
MSH5O43196 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC26.35■■□□□ 1.81
MSH5O43196 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
MSH5O43196 AC073575.2-201ENST00000614212 627 ntBASIC26.35■■□□□ 1.81
MSH5O43196 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC26.35■■□□□ 1.81
MSH5O43196 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
MSH5O43196 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
MSH5O43196 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
MSH5O43196 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC26.35■■□□□ 1.81
MSH5O43196 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
MSH5O43196 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC26.34■■□□□ 1.81
MSH5O43196 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
MSH5O43196 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MSH5O43196 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MSH5O43196 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
MSH5O43196 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
MSH5O43196 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.34■■□□□ 1.81
MSH5O43196 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC26.34■■□□□ 1.81
MSH5O43196 AL049597.2-201ENST00000565575 961 ntBASIC26.34■■□□□ 1.81
MSH5O43196 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC26.34■■□□□ 1.81
MSH5O43196 CYP21A1P-202ENST00000354927 1481 ntBASIC26.34■■□□□ 1.81
MSH5O43196 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
MSH5O43196 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC26.34■■□□□ 1.81
MSH5O43196 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MSH5O43196 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
MSH5O43196 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC26.33■■□□□ 1.81
MSH5O43196 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC26.33■■□□□ 1.81
MSH5O43196 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.33■■□□□ 1.81
MSH5O43196 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
MSH5O43196 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MSH5O43196 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC26.33■■□□□ 1.81
MSH5O43196 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
MSH5O43196 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC26.33■■□□□ 1.81
MSH5O43196 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
MSH5O43196 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.33■■□□□ 1.81
MSH5O43196 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
MSH5O43196 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC26.33■■□□□ 1.81
MSH5O43196 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
MSH5O43196 AC105020.6-201ENST00000621523 1217 ntBASIC26.33■■□□□ 1.81
MSH5O43196 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MSH5O43196 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.33■■□□□ 1.81
MSH5O43196 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC26.33■■□□□ 1.81
MSH5O43196 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
MSH5O43196 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
MSH5O43196 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
MSH5O43196 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
MSH5O43196 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
MSH5O43196 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
MSH5O43196 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
MSH5O43196 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MSH5O43196 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.32■■□□□ 1.8
MSH5O43196 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
MSH5O43196 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MSH5O43196 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MSH5O43196 PRELID3BP7-201ENST00000503606 469 ntBASIC26.32■■□□□ 1.8
MSH5O43196 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MSH5O43196 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MSH5O43196 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC26.32■■□□□ 1.8
MSH5O43196 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.32■■□□□ 1.8
MSH5O43196 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MSH5O43196 AC012181.2-201ENST00000570210 699 ntBASIC26.32■■□□□ 1.8
MSH5O43196 AC006557.6-201ENST00000623071 864 ntBASIC26.32■■□□□ 1.8
MSH5O43196 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.32■■□□□ 1.8
MSH5O43196 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
MSH5O43196 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MSH5O43196 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
MSH5O43196 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
MSH5O43196 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
MSH5O43196 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
MSH5O43196 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MSH5O43196 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms