Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.43■□□□□ 0.7
PHGDHO43175 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHGDHO43175 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
PHGDHO43175 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.43■□□□□ 0.7
PHGDHO43175 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PHGDHO43175 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.43■□□□□ 0.7
PHGDHO43175 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.43■□□□□ 0.7
PHGDHO43175 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHGDHO43175 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHGDHO43175 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.43■□□□□ 0.7
PHGDHO43175 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHGDHO43175 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHGDHO43175 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.43■□□□□ 0.7
PHGDHO43175 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PHGDHO43175 MIPEPP3-201ENST00000412105 444 ntBASIC19.43■□□□□ 0.7
PHGDHO43175 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.43■□□□□ 0.7
PHGDHO43175 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.43■□□□□ 0.7
PHGDHO43175 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHGDHO43175 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.43■□□□□ 0.7
PHGDHO43175 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.43■□□□□ 0.7
PHGDHO43175 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PHGDHO43175 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHGDHO43175 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHGDHO43175 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHGDHO43175 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHGDHO43175 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.42■□□□□ 0.7
PHGDHO43175 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PHGDHO43175 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.42■□□□□ 0.7
PHGDHO43175 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHGDHO43175 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PHGDHO43175 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.42■□□□□ 0.7
PHGDHO43175 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHGDHO43175 DUSP5P2-201ENST00000426873 1033 ntBASIC19.42■□□□□ 0.7
PHGDHO43175 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PHGDHO43175 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.42■□□□□ 0.7
PHGDHO43175 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.42■□□□□ 0.7
PHGDHO43175 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.42■□□□□ 0.7
PHGDHO43175 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PHGDHO43175 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHGDHO43175 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PHGDHO43175 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.42■□□□□ 0.7
PHGDHO43175 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHGDHO43175 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHGDHO43175 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHGDHO43175 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PHGDHO43175 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.42■□□□□ 0.7
PHGDHO43175 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.42■□□□□ 0.7
PHGDHO43175 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHGDHO43175 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PHGDHO43175 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PHGDHO43175 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PHGDHO43175 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHGDHO43175 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHGDHO43175 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHGDHO43175 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHGDHO43175 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHGDHO43175 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.41■□□□□ 0.7
PHGDHO43175 AC083906.2-201ENST00000511578 360 ntBASIC19.41■□□□□ 0.7
PHGDHO43175 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHGDHO43175 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHGDHO43175 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHGDHO43175 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PHGDHO43175 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHGDHO43175 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PHGDHO43175 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PHGDHO43175 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.4■□□□□ 0.7
PHGDHO43175 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 AC124283.5-201ENST00000624661 1809 ntBASIC19.4■□□□□ 0.7
PHGDHO43175 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PHGDHO43175 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 AL390719.1-204ENST00000412397 1219 ntBASIC19.4■□□□□ 0.7
PHGDHO43175 AC006970.2-201ENST00000450065 779 ntBASIC19.4■□□□□ 0.7
PHGDHO43175 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.4■□□□□ 0.7
PHGDHO43175 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.4■□□□□ 0.7
PHGDHO43175 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PHGDHO43175 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.4■□□□□ 0.7
PHGDHO43175 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.4■□□□□ 0.7
PHGDHO43175 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.4■□□□□ 0.7
PHGDHO43175 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.4■□□□□ 0.7
PHGDHO43175 AL121832.2-201ENST00000610979 668 ntBASIC19.4■□□□□ 0.7
PHGDHO43175 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.4■□□□□ 0.7
PHGDHO43175 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PHGDHO43175 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PHGDHO43175 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PHGDHO43175 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHGDHO43175 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.4■□□□□ 0.7
PHGDHO43175 TFP1-202ENST00000475455 1573 ntBASIC19.4■□□□□ 0.7
PHGDHO43175 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHGDHO43175 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms