Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
FOXE1O00358 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXE1O00358 RNA5SP413-201ENST00000516373 109 ntBASIC18.65■□□□□ 0.58
FOXE1O00358 AP003097.1-201ENST00000530657 1135 ntBASIC18.65■□□□□ 0.58
FOXE1O00358 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXE1O00358 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.65■□□□□ 0.58
FOXE1O00358 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXE1O00358 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
FOXE1O00358 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
FOXE1O00358 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
FOXE1O00358 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
FOXE1O00358 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.64■□□□□ 0.58
FOXE1O00358 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
FOXE1O00358 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXE1O00358 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXE1O00358 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXE1O00358 ZNF815P-204ENST00000434898 1737 ntBASIC18.64■□□□□ 0.57
FOXE1O00358 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXE1O00358 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXE1O00358 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXE1O00358 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXE1O00358 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXE1O00358 AC026366.1-201ENST00000488803 879 ntBASIC18.64■□□□□ 0.57
FOXE1O00358 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXE1O00358 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.64■□□□□ 0.57
FOXE1O00358 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.64■□□□□ 0.57
FOXE1O00358 KRT18P6-201ENST00000555540 1265 ntBASIC18.64■□□□□ 0.57
FOXE1O00358 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXE1O00358 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXE1O00358 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXE1O00358 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXE1O00358 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.64■□□□□ 0.57
FOXE1O00358 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FOXE1O00358 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
FOXE1O00358 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
FOXE1O00358 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXE1O00358 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.64■□□□□ 0.57
FOXE1O00358 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXE1O00358 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.63■□□□□ 0.57
FOXE1O00358 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXE1O00358 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXE1O00358 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
FOXE1O00358 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXE1O00358 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.63■□□□□ 0.57
FOXE1O00358 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
FOXE1O00358 TUBB8P6-201ENST00000436895 1288 ntBASIC18.63■□□□□ 0.57
FOXE1O00358 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.63■□□□□ 0.57
FOXE1O00358 PRKY-204ENST00000533551 1019 ntBASIC18.63■□□□□ 0.57
FOXE1O00358 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
FOXE1O00358 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
FOXE1O00358 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXE1O00358 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXE1O00358 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXE1O00358 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.62■□□□□ 0.57
FOXE1O00358 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.62■□□□□ 0.57
FOXE1O00358 KRT17P3-201ENST00000420566 1262 ntBASIC18.62■□□□□ 0.57
FOXE1O00358 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
FOXE1O00358 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.62■□□□□ 0.57
FOXE1O00358 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.62■□□□□ 0.57
FOXE1O00358 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FOXE1O00358 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXE1O00358 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
FOXE1O00358 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 BX323043.1-201ENST00000641006 1765 ntBASIC18.62■□□□□ 0.57
FOXE1O00358 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FOXE1O00358 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXE1O00358 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.62■□□□□ 0.57
FOXE1O00358 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.62■□□□□ 0.57
FOXE1O00358 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXE1O00358 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FOXE1O00358 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXE1O00358 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FOXE1O00358 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXE1O00358 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXE1O00358 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXE1O00358 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXE1O00358 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms