Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC008694.1-202ENST00000636953 945 ntBASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM49D1C9J1S8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 AL161938.1-201ENST00000569833 2180 ntBASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 AL138781.2-201ENST00000617896 1843 ntBASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 AC018553.1-201ENST00000616682 1458 ntBASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 KRT18P5-201ENST00000436075 1291 ntBASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM49D1C9J1S8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 AC020763.4-201ENST00000623414 4170 ntBASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 AC010980.2-201ENST00000587099 1412 ntBASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 MIR6821-201ENST00000617625 74 ntBASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 KRT17P1-201ENST00000399211 1546 ntBASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 CROCCP3-202ENST00000420820 1947 ntBASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM49D1C9J1S8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM49D1C9J1S8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms