Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
MEIS3P1A6NDR6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 AC087633.2-202ENST00000565166 1439 ntBASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 PGM5P4-201ENST00000421970 445 ntBASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 AL031432.3-201ENST00000607698 485 ntBASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 PTBP1P-201ENST00000554374 1601 ntBASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 AC008406.3-201ENST00000620001 1374 ntBASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MEIS3P1A6NDR6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 KRT8P17-201ENST00000453110 1448 ntBASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MEIS3P1A6NDR6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MEIS3P1A6NDR6 KRT16P6-202ENST00000425692 1426 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms