Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SBNO1A3KN83 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SBNO1A3KN83 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SBNO1A3KN83 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SBNO1A3KN83 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
SBNO1A3KN83 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC26.6■■□□□ 1.85
SBNO1A3KN83 PP7080-204ENST00000510714 601 ntTSL 3 BASIC26.6■■□□□ 1.85
SBNO1A3KN83 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC26.6■■□□□ 1.85
SBNO1A3KN83 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC26.6■■□□□ 1.85
SBNO1A3KN83 NDUFV2-AS1-203ENST00000608008 779 ntBASIC26.6■■□□□ 1.85
SBNO1A3KN83 AC083849.1-201ENST00000615227 514 ntBASIC26.6■■□□□ 1.85
SBNO1A3KN83 VPS72-207ENST00000640458 689 ntTSL 5 BASIC26.6■■□□□ 1.85
SBNO1A3KN83 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SBNO1A3KN83 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC26.6■■□□□ 1.85
SBNO1A3KN83 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SBNO1A3KN83 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SBNO1A3KN83 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SBNO1A3KN83 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SBNO1A3KN83 AC092720.2-201ENST00000602388 1665 ntBASIC26.6■■□□□ 1.85
SBNO1A3KN83 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SBNO1A3KN83 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.59■■□□□ 1.85
SBNO1A3KN83 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
SBNO1A3KN83 CLN6-214ENST00000636314 442 ntTSL 3 BASIC26.59■■□□□ 1.85
SBNO1A3KN83 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SBNO1A3KN83 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SBNO1A3KN83 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SBNO1A3KN83 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SBNO1A3KN83 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
SBNO1A3KN83 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
SBNO1A3KN83 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SBNO1A3KN83 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
SBNO1A3KN83 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SBNO1A3KN83 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC26.58■■□□□ 1.85
SBNO1A3KN83 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC26.58■■□□□ 1.85
SBNO1A3KN83 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SBNO1A3KN83 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SBNO1A3KN83 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SBNO1A3KN83 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SBNO1A3KN83 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SBNO1A3KN83 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
SBNO1A3KN83 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC26.58■■□□□ 1.84
SBNO1A3KN83 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SBNO1A3KN83 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC26.58■■□□□ 1.84
SBNO1A3KN83 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SBNO1A3KN83 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
SBNO1A3KN83 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.84
SBNO1A3KN83 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
SBNO1A3KN83 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SBNO1A3KN83 KRT8P8-201ENST00000434750 1448 ntBASIC26.57■■□□□ 1.84
SBNO1A3KN83 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC26.57■■□□□ 1.84
SBNO1A3KN83 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SBNO1A3KN83 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC26.57■■□□□ 1.84
SBNO1A3KN83 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SBNO1A3KN83 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC26.57■■□□□ 1.84
SBNO1A3KN83 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SBNO1A3KN83 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
SBNO1A3KN83 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC26.57■■□□□ 1.84
SBNO1A3KN83 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC26.57■■□□□ 1.84
SBNO1A3KN83 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SBNO1A3KN83 VENTXP5-201ENST00000523979 775 ntBASIC26.57■■□□□ 1.84
SBNO1A3KN83 AP003041.3-201ENST00000527151 707 ntBASIC26.57■■□□□ 1.84
SBNO1A3KN83 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC26.57■■□□□ 1.84
SBNO1A3KN83 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC26.57■■□□□ 1.84
SBNO1A3KN83 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC26.57■■□□□ 1.84
SBNO1A3KN83 DFFB-212ENST00000625756 649 ntTSL 5 BASIC26.57■■□□□ 1.84
SBNO1A3KN83 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SBNO1A3KN83 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SBNO1A3KN83 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.56■■□□□ 1.84
SBNO1A3KN83 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SBNO1A3KN83 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
SBNO1A3KN83 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SBNO1A3KN83 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC26.56■■□□□ 1.84
SBNO1A3KN83 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
SBNO1A3KN83 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SBNO1A3KN83 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC26.56■■□□□ 1.84
SBNO1A3KN83 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC26.56■■□□□ 1.84
SBNO1A3KN83 AC140113.3-201ENST00000605663 199 ntBASIC26.56■■□□□ 1.84
SBNO1A3KN83 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SBNO1A3KN83 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SBNO1A3KN83 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC26.55■■□□□ 1.84
SBNO1A3KN83 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SBNO1A3KN83 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SBNO1A3KN83 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC26.55■■□□□ 1.84
SBNO1A3KN83 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SBNO1A3KN83 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC26.55■■□□□ 1.84
SBNO1A3KN83 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SBNO1A3KN83 HYMAI.1-201ENST00000620949 238 ntBASIC26.55■■□□□ 1.84
SBNO1A3KN83 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC26.55■■□□□ 1.84
SBNO1A3KN83 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SBNO1A3KN83 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC26.55■■□□□ 1.84
SBNO1A3KN83 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
SBNO1A3KN83 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.55■■□□□ 1.84
SBNO1A3KN83 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SBNO1A3KN83 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SBNO1A3KN83 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC26.54■■□□□ 1.84
SBNO1A3KN83 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SBNO1A3KN83 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC26.54■■□□□ 1.84
SBNO1A3KN83 SNX5-210ENST00000481323 562 ntTSL 3 BASIC26.54■■□□□ 1.84
SBNO1A3KN83 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC26.54■■□□□ 1.84
SBNO1A3KN83 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms