Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CCDC144AA2RUR9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 INGX-201ENST00000359239 846 ntBASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 ECEL1P2-202ENST00000465689 757 ntBASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CCDC144AA2RUR9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC28.14■■■□□ 2.1
CCDC144AA2RUR9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
CCDC144AA2RUR9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC28.14■■■□□ 2.1
CCDC144AA2RUR9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CCDC144AA2RUR9 KRT8P41-201ENST00000533985 1514 ntBASIC28.14■■■□□ 2.1
CCDC144AA2RUR9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
CCDC144AA2RUR9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
CCDC144AA2RUR9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
CCDC144AA2RUR9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CCDC144AA2RUR9 AL137013.1-201ENST00000432946 1228 ntBASIC28.14■■■□□ 2.1
CCDC144AA2RUR9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CCDC144AA2RUR9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC28.14■■■□□ 2.1
CCDC144AA2RUR9 TCF3P1-201ENST00000423021 1937 ntBASIC28.14■■■□□ 2.09
CCDC144AA2RUR9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.09
CCDC144AA2RUR9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC28.14■■■□□ 2.09
CCDC144AA2RUR9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC144AA2RUR9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
CCDC144AA2RUR9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC144AA2RUR9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC144AA2RUR9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC28.13■■■□□ 2.09
CCDC144AA2RUR9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC28.13■■■□□ 2.09
CCDC144AA2RUR9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC28.13■■■□□ 2.09
CCDC144AA2RUR9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
CCDC144AA2RUR9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CCDC144AA2RUR9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
CCDC144AA2RUR9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 KRT18P35-201ENST00000510488 1269 ntBASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CCDC144AA2RUR9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 HIST1H2APS4-201ENST00000362070 348 ntBASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 AC128688.1-201ENST00000487626 519 ntBASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC28.1■■■□□ 2.09
CCDC144AA2RUR9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CCDC144AA2RUR9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC28.09■■■□□ 2.09
CCDC144AA2RUR9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CCDC144AA2RUR9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms