Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC78A2IDD5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC78A2IDD5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.77■□□□□ 0.75
CCDC78A2IDD5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CCDC78A2IDD5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC78A2IDD5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC78A2IDD5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 AC073210.2-201ENST00000430369 194 ntBASIC19.76■□□□□ 0.75
CCDC78A2IDD5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.76■□□□□ 0.75
CCDC78A2IDD5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCDC78A2IDD5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 AC138932.1-201ENST00000534164 6830 ntBASIC19.75■□□□□ 0.75
CCDC78A2IDD5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC78A2IDD5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC78A2IDD5 TFP1-202ENST00000475455 1573 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms