Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TCRBV7S3A2A0A539 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 AC091874.3-201ENST00000512672 1195 ntBASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 TEX21P-204ENST00000641479 1693 ntBASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TCRBV7S3A2A0A539 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 AL390719.1-204ENST00000412397 1219 ntBASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 AC006970.2-201ENST00000450065 779 ntBASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 AC092118.2-201ENST00000613495 667 ntBASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.86■□□□□ 0.77
TCRBV7S3A2A0A539 AL161938.1-201ENST00000569833 2180 ntBASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TCRBV7S3A2A0A539 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.84■□□□□ 0.77
TCRBV7S3A2A0A539 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms