Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238LA0A1B0GVL6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238LA0A1B0GVL6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238LA0A1B0GVL6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TMEM238LA0A1B0GVL6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
TMEM238LA0A1B0GVL6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TMEM238LA0A1B0GVL6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 PRORSD1P-202ENST00000563365 2154 ntBASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
TMEM238LA0A1B0GVL6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 AC068587.6-202ENST00000641839 5619 ntBASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TMEM238LA0A1B0GVL6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TMEM238LA0A1B0GVL6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
TMEM238LA0A1B0GVL6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM238LA0A1B0GVL6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM238LA0A1B0GVL6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM238LA0A1B0GVL6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM238LA0A1B0GVL6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TMEM238LA0A1B0GVL6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TMEM238LA0A1B0GVL6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms