Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 AC087633.2-202ENST00000565166 1439 ntBASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 Z82202.1-201ENST00000623446 1880 ntBASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 KRT18P14-201ENST00000534205 1250 ntBASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRAV13-1A0A0B4J241 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 KRT19P1-201ENST00000405746 1186 ntBASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 YBX1P1-201ENST00000445822 960 ntBASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV13-1A0A0B4J241 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 KRT16P6-202ENST00000425692 1426 ntBASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 UBE2DNL-204ENST00000602536 740 ntBASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 AC009237.14-201ENST00000609975 1594 ntBASIC13.6□□□□□ -0.23
TRAV13-1A0A0B4J241 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms