Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 CD99P1-205ENST00000527459 561 ntBASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV2A0A0B4J234 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRAV2A0A0B4J234 YBX1P10-201ENST00000444752 975 ntBASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 AC008403.3-201ENST00000598924 454 ntBASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV2A0A0B4J234 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV2A0A0B4J234 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms