Protein–RNA interactions for Protein: A0A075B6W5

TRAV23DV6, T-cell receptor alpha variable 23/delta variable 6 (Fragment), humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV23DV6A0A075B6W5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV23DV6A0A075B6W5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAV23DV6A0A075B6W5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV23DV6A0A075B6W5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV23DV6A0A075B6W5 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
TRAV23DV6A0A075B6W5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TRAV23DV6A0A075B6W5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAV23DV6A0A075B6W5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
TRAV23DV6A0A075B6W5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
TRAV23DV6A0A075B6W5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 AC020916.1-201ENST00000587762 1774 ntBASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 LINC01465-201ENST00000408887 1940 ntBASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 AL355001.2-201ENST00000620617 1191 ntBASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAV23DV6A0A075B6W5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 AC009237.14-201ENST00000609975 1594 ntBASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 AC105265.2-201ENST00000467189 838 ntBASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 DUX4L2-201ENST00000561772 1275 ntBASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 DUX4L6-201ENST00000626483 1275 ntBASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 DUX4L1-201ENST00000627662 1275 ntBASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 DUX4L8-201ENST00000629013 1275 ntBASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 DUX4L3-201ENST00000630187 1275 ntBASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 DUX4L7-201ENST00000630678 1275 ntBASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 DUX4L5-201ENST00000630834 1275 ntBASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRAV23DV6A0A075B6W5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC12.65□□□□□ -0.38
TRAV23DV6A0A075B6W5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms