Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SALL4P2-201ENST00000423288 2910 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 SAMMSON-213ENST00000641336 1521 ntBASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RSPO3Q9BXY4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AC008549.2-201ENST00000333482 706 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 SNORA70-201ENST00000384436 135 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 SNORA70.10-201ENST00000384515 134 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 RNA5SP296-201ENST00000410523 111 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 CBX1P3-201ENST00000413296 527 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 RPS26P4-201ENST00000431743 355 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 RN7SL515P-201ENST00000463999 297 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AC090686.1-201ENST00000481577 749 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 RPL32P9-201ENST00000487963 407 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AC072052.1-201ENST00000496556 306 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AC006499.3-201ENST00000506077 748 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 MRPS33P2-201ENST00000507850 322 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 RNA5SP43-201ENST00000516559 110 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AL049830.4-201ENST00000555149 351 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AC044860.2-201ENST00000561005 179 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AL451049.1-201ENST00000608672 497 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AL122125.1-201ENST00000616999 600 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AP002505.2-201ENST00000623585 696 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 AC009643.2-201ENST00000603543 1448 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 CDC27P2-201ENST00000425026 1922 ntBASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RSPO3Q9BXY4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 SNORA17.1-201ENST00000362945 126 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AL121878.1-201ENST00000418638 859 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 SLC35E1P1-201ENST00000419313 864 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AC004980.3-201ENST00000447046 365 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 RHEBP2-201ENST00000450289 600 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AC091180.1-201ENST00000462104 372 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 RN7SL329P-201ENST00000467740 299 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AC090589.1-201ENST00000473109 362 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 RN7SL222P-201ENST00000476452 299 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 OR2AO1P-201ENST00000476497 403 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 HMGB3P16-201ENST00000508037 287 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 RNA5SP303-201ENST00000516192 130 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AL049779.2-201ENST00000553847 315 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AC009852.2-201ENST00000567898 485 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 AL022401.1-201ENST00000619498 108 ntBASIC4.59□□□□□ -1.67
RSPO3Q9BXY4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms