Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL8A1P27658 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.52□□□□□ -1.37
COL8A1P27658 THEM7P-201ENST00000419556 672 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 DYNLL1P7-201ENST00000429273 258 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 RPL36AP53-201ENST00000432891 316 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 AL627308.1-201ENST00000435693 821 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 AL731892.1-201ENST00000437364 1192 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 CACYBPP1-201ENST00000438592 684 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6.52□□□□□ -1.37
COL8A1P27658 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COL8A1P27658 AC005002.1-201ENST00000447458 540 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 AC118758.1-202ENST00000454719 225 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.52□□□□□ -1.37
COL8A1P27658 MTCO3P10-201ENST00000455912 772 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 PSAT1P4-201ENST00000466500 526 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL8A1P27658 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.52□□□□□ -1.37
COL8A1P27658 UGT2A3P7-201ENST00000510485 734 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.52□□□□□ -1.37
COL8A1P27658 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.52□□□□□ -1.37
COL8A1P27658 IGHVIII-67-3-201ENST00000517650 232 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.52□□□□□ -1.37
COL8A1P27658 MTND6P19-201ENST00000519399 524 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 AP002404.1-201ENST00000532005 451 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.52□□□□□ -1.37
COL8A1P27658 AC008782.1-201ENST00000603386 430 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 CYP2C61P-201ENST00000604072 290 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 AP000654.2-201ENST00000605633 586 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 AL390877.1-201ENST00000605704 214 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 AL022238.3-201ENST00000609279 443 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COL8A1P27658 MIR6806-201ENST00000622141 64 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL8A1P27658 AC027279.1-201ENST00000568885 4284 ntBASIC6.52□□□□□ -1.37
COL8A1P27658 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL8A1P27658 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
COL8A1P27658 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL8A1P27658 GPI-202ENST00000415930 4000 ntTSL 2 BASIC6.52□□□□□ -1.37
COL8A1P27658 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC6.52□□□□□ -1.37
COL8A1P27658 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL8A1P27658 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL8A1P27658 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL8A1P27658 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL8A1P27658 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
COL8A1P27658 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL8A1P27658 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.52□□□□□ -1.37
COL8A1P27658 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
COL8A1P27658 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
COL8A1P27658 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC6.52□□□□□ -1.37
COL8A1P27658 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC6.52□□□□□ -1.37
COL8A1P27658 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL8A1P27658 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.51□□□□□ -1.37
COL8A1P27658 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL8A1P27658 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL8A1P27658 RBPJP7-201ENST00000442803 1447 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 RBPJP5-201ENST00000449433 1447 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.51□□□□□ -1.37
COL8A1P27658 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.51□□□□□ -1.37
COL8A1P27658 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
COL8A1P27658 HSP90AB2P-201ENST00000507090 2176 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.51□□□□□ -1.37
COL8A1P27658 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL8A1P27658 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL8A1P27658 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL8A1P27658 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL8A1P27658 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL8A1P27658 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC6.51□□□□□ -1.37
COL8A1P27658 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.51□□□□□ -1.37
COL8A1P27658 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC6.51□□□□□ -1.37
COL8A1P27658 AC021242.1-201ENST00000507315 2035 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL8A1P27658 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL8A1P27658 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL8A1P27658 RNU5E-8P-201ENST00000363502 116 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 RN7SKP44-201ENST00000363602 316 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 RNA5SP232-201ENST00000364144 119 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 Y_RNA.231-201ENST00000364358 102 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL8A1P27658 SNORD3H-201ENST00000384486 214 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 SNORD116-29-201ENST00000384516 83 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL8A1P27658 RNU6-316P-201ENST00000391027 107 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 FAUP2-201ENST00000394301 401 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 RN7SKP268-201ENST00000411107 316 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 RN7SKP85-201ENST00000411349 318 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 RPL26P37-201ENST00000411983 438 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 OR5W1P-201ENST00000423705 938 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL8A1P27658 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.51□□□□□ -1.37
COL8A1P27658 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.51□□□□□ -1.37
COL8A1P27658 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.51□□□□□ -1.37
COL8A1P27658 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.51□□□□□ -1.37
COL8A1P27658 TCEA1P1-201ENST00000449716 880 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 AC093799.1-201ENST00000452411 499 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 MED28P7-201ENST00000456611 530 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 AC135721.2-201ENST00000464237 300 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.51□□□□□ -1.37
COL8A1P27658 AC083798.1-201ENST00000472671 131 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 H3F3AP5-201ENST00000475267 429 ntBASIC6.51□□□□□ -1.37
COL8A1P27658 RN7SL143P-201ENST00000496780 297 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms