RNA–Protein interactions for RNA: ENST00000438538.1

AC003092.1-202, humanhuman

TSL 3 BASIC

Gene AC003092.1, Length 743 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003092.1-202ENST00000438538 AEBP2Q6ZN18 517 aaPredicted RBP20.77■□□□□ 0.92
AC003092.1-202ENST00000438538 CHIC1Q5VXU3 224 aa19.56■□□□□ 0.72
AC003092.1-202ENST00000438538 SENP3Q9H4L4 574 aaPredicted RBP17.72■□□□□ 0.43
AC003092.1-202ENST00000438538 PHF23Q9BUL5 403 aaPredicted RBP17.46■□□□□ 0.39
AC003092.1-202ENST00000438538 FOXD1Q16676 465 aa16.55■□□□□ 0.24
AC003092.1-202ENST00000438538 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
AC003092.1-202ENST00000438538 MSH5O43196 834 aa15.54■□□□□ 0.08
AC003092.1-202ENST00000438538 POTEDQ86YR6 584 aa15.46■□□□□ 0.07
AC003092.1-202ENST00000438538 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
AC003092.1-202ENST00000438538 PPP6R1Q9UPN7 881 aa15.35■□□□□ 0.05
AC003092.1-202ENST00000438538 ADRA2BP18089 450 aa15.27■□□□□ 0.04
AC003092.1-202ENST00000438538 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
AC003092.1-202ENST00000438538 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
AC003092.1-202ENST00000438538 SCAF1Q9H7N4 1312 aaKnown RBP13.95□□□□□ -0.18
AC003092.1-202ENST00000438538 PPP4R3CPQ6ZMV5 832 aa13.85□□□□□ -0.19
AC003092.1-202ENST00000438538 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
AC003092.1-202ENST00000438538 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
AC003092.1-202ENST00000438538 HOXD11P31277 338 aaPredicted RBP13.48□□□□□ -0.25
AC003092.1-202ENST00000438538 KCNA4P22459 653 aa13.44□□□□□ -0.26
AC003092.1-202ENST00000438538 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
AC003092.1-202ENST00000438538 DCAF8L1A6NGE4 600 aa13.38□□□□□ -0.27
AC003092.1-202ENST00000438538 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
AC003092.1-202ENST00000438538 RNF39Q9H2S5 420 aa13.27□□□□□ -0.29
AC003092.1-202ENST00000438538 NPM3O75607 178 aaKnown RBP13.26□□□□□ -0.29
AC003092.1-202ENST00000438538 DNAJC5BQ9UF47 199 aa13.08□□□□□ -0.32
AC003092.1-202ENST00000438538 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
AC003092.1-202ENST00000438538 SLC4A1APQ9BWU0 796 aaKnown RBP12.83□□□□□ -0.36
AC003092.1-202ENST00000438538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
AC003092.1-202ENST00000438538 U3KPZ7 1027 aaPredicted RBP12.53□□□□□ -0.4
AC003092.1-202ENST00000438538 SLC4A2P04920 1241 aa12.52□□□□□ -0.41
AC003092.1-202ENST00000438538 FOXD4L1Q9NU39 408 aa12.44□□□□□ -0.42
AC003092.1-202ENST00000438538 SPINK5Q9NQ38 1064 aaPredicted RBP12.39□□□□□ -0.43
AC003092.1-202ENST00000438538 DSG3P32926 999 aa12.36□□□□□ -0.43
AC003092.1-202ENST00000438538 ZBTB22O15209 634 aa12.34□□□□□ -0.43
AC003092.1-202ENST00000438538 CAPN15O75808 1086 aa12.33□□□□□ -0.44
AC003092.1-202ENST00000438538 EHMT2Q96KQ7 1210 aa12.33□□□□□ -0.44
AC003092.1-202ENST00000438538 MYCNP04198 464 aaPredicted RBP12.3□□□□□ -0.44
AC003092.1-202ENST00000438538 CSRNP3Q8WYN3 585 aa12.29□□□□□ -0.44
AC003092.1-202ENST00000438538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.27□□□□□ -0.45
AC003092.1-202ENST00000438538 HNRNPUL2Q1KMD3 747 aaKnown RBP12.27□□□□□ -0.45
AC003092.1-202ENST00000438538 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
AC003092.1-202ENST00000438538 APLP2Q06481 763 aa12.17□□□□□ -0.46
AC003092.1-202ENST00000438538 ZNF219Q9P2Y4 722 aaPredicted RBP12.1□□□□□ -0.47
AC003092.1-202ENST00000438538 ATXN8OSP0DMR3 200 aa12.09□□□□□ -0.47
AC003092.1-202ENST00000438538 TRHP20396 242 aaPredicted RBP12.09□□□□□ -0.47
AC003092.1-202ENST00000438538 POTEHQ6S545 545 aa12.07□□□□□ -0.48
AC003092.1-202ENST00000438538 ABCB7O75027 752 aa12.03□□□□□ -0.48
AC003092.1-202ENST00000438538 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
AC003092.1-202ENST00000438538 RBM42Q9BTD8 480 aaKnown RBP11.77□□□□□ -0.53
AC003092.1-202ENST00000438538 POLA2Q14181 598 aa11.76□□□□□ -0.53
AC003092.1-202ENST00000438538 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
AC003092.1-202ENST00000438538 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
AC003092.1-202ENST00000438538 FBLN2P98095 1184 aa11.49□□□□□ -0.57
AC003092.1-202ENST00000438538 AKT1S1Q96B36 256 aa11.47□□□□□ -0.57
AC003092.1-202ENST00000438538 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
AC003092.1-202ENST00000438538 MKRN4PQ13434 485 aaPredicted RBP11.38□□□□□ -0.59
AC003092.1-202ENST00000438538 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
AC003092.1-202ENST00000438538 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
AC003092.1-202ENST00000438538 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
AC003092.1-202ENST00000438538 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
AC003092.1-202ENST00000438538 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
AC003092.1-202ENST00000438538 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
AC003092.1-202ENST00000438538 SP7Q8TDD2 431 aaPredicted RBP11.24□□□□□ -0.61
AC003092.1-202ENST00000438538 FXR2P51116 673 aaKnown RBP eCLIP11.21□□□□□ -0.61
AC003092.1-202ENST00000438538 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
AC003092.1-202ENST00000438538 ZNF692Q9BU19 519 aaPredicted RBP11.15□□□□□ -0.62
AC003092.1-202ENST00000438538 SSUH2Q9Y2M2 353 aa11.12□□□□□ -0.63
AC003092.1-202ENST00000438538 FKBP8Q14318 412 aa11.09□□□□□ -0.63
AC003092.1-202ENST00000438538 HAX1O00165 279 aa11.08□□□□□ -0.64
AC003092.1-202ENST00000438538 PROM2Q8N271 834 aa11.01□□□□□ -0.65
AC003092.1-202ENST00000438538 EVX2Q03828 476 aa10.99□□□□□ -0.65
AC003092.1-202ENST00000438538 PABPN1Q86U42 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
AC003092.1-202ENST00000438538 SPDYE1Q8NFV5 336 aaPredicted RBP10.98□□□□□ -0.65
AC003092.1-202ENST00000438538 PRKAR2AP13861 404 aaKnown RBP10.94□□□□□ -0.66
AC003092.1-202ENST00000438538 CLEC11AQ9Y240 323 aa10.93□□□□□ -0.66
AC003092.1-202ENST00000438538 STAG3Q9UJ98 1225 aa10.89□□□□□ -0.67
AC003092.1-202ENST00000438538 NISCHQ9Y2I1 1504 aa10.85□□□□□ -0.67
AC003092.1-202ENST00000438538 C19orf67A6NJJ6 358 aa10.85□□□□□ -0.67
AC003092.1-202ENST00000438538 FBXO3Q9UK99 471 aa10.82□□□□□ -0.68
AC003092.1-202ENST00000438538 CHADLQ6NUI6 762 aa10.77□□□□□ -0.69
AC003092.1-202ENST00000438538 PRR29P0C7W0 189 aa10.75□□□□□ -0.69
AC003092.1-202ENST00000438538 GABBR2O75899 941 aa10.71□□□□□ -0.69
AC003092.1-202ENST00000438538 FARP1Q9Y4F1 1045 aaPredicted RBP10.62□□□□□ -0.71
AC003092.1-202ENST00000438538 PLEKHG5O94827 1062 aa10.6□□□□□ -0.71
AC003092.1-202ENST00000438538 VASPP50552 380 aaPredicted RBP10.59□□□□□ -0.71
AC003092.1-202ENST00000438538 CD44P16070 742 aaKnown RBP10.58□□□□□ -0.72
AC003092.1-202ENST00000438538 MIER1Q8N108 512 aa10.58□□□□□ -0.72
AC003092.1-202ENST00000438538 CREBZFQ9NS37 354 aa10.57□□□□□ -0.72
AC003092.1-202ENST00000438538 PLCD3Q8N3E9 789 aa10.55□□□□□ -0.72
AC003092.1-202ENST00000438538 LHX8Q68G74 356 aa10.53□□□□□ -0.72
AC003092.1-202ENST00000438538 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
AC003092.1-202ENST00000438538 POTEIP0CG38 1075 aa10.51□□□□□ -0.73
AC003092.1-202ENST00000438538 CLCN6P51797 869 aa10.5□□□□□ -0.73
AC003092.1-202ENST00000438538 NPM1P06748 294 aaKnown RBP eCLIP10.46□□□□□ -0.73
AC003092.1-202ENST00000438538 MNX1P50219 401 aaPredicted RBP10.46□□□□□ -0.73
AC003092.1-202ENST00000438538 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
AC003092.1-202ENST00000438538 IFNLR1Q8IU57 520 aaPredicted RBP10.44□□□□□ -0.74
AC003092.1-202ENST00000438538 KLHL34Q8N239 644 aa10.41□□□□□ -0.74
AC003092.1-202ENST00000438538 ZRANB1Q9UGI0 708 aa10.39□□□□□ -0.75
AC003092.1-202ENST00000438538 SPOCK2Q92563 424 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms