RNA–Protein interactions for RNA: ENST00000455038.1

AC096543.1-201, humanhuman

TSL 3 BASIC

Gene AC096543.1, Length 823 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC096543.1-201ENST00000455038 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.81
AC096543.1-201ENST00000455038 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
AC096543.1-201ENST00000455038 SENP3Q9H4L4 574 aaPredicted RBP17.23■□□□□ 0.35
AC096543.1-201ENST00000455038 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
AC096543.1-201ENST00000455038 FOXD1Q16676 465 aa15.96■□□□□ 0.15
AC096543.1-201ENST00000455038 PLPPR3Q6T4P5 718 aa15.73■□□□□ 0.11
AC096543.1-201ENST00000455038 PPP6R1Q9UPN7 881 aa15.12■□□□□ 0.01
AC096543.1-201ENST00000455038 ADRA2BP18089 450 aa15.1■□□□□ 0.01
AC096543.1-201ENST00000455038 PIAS4Q8N2W9 510 aaPredicted RBP15.01□□□□□ -0.01
AC096543.1-201ENST00000455038 POTEDQ86YR6 584 aa14.99□□□□□ -0.01
AC096543.1-201ENST00000455038 MSH5O43196 834 aa14.89□□□□□ -0.03
AC096543.1-201ENST00000455038 SCAF1Q9H7N4 1312 aaKnown RBP13.93□□□□□ -0.18
AC096543.1-201ENST00000455038 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
AC096543.1-201ENST00000455038 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.21
AC096543.1-201ENST00000455038 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
AC096543.1-201ENST00000455038 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
AC096543.1-201ENST00000455038 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
AC096543.1-201ENST00000455038 HOXD11P31277 338 aaPredicted RBP13.29□□□□□ -0.28
AC096543.1-201ENST00000455038 RNF216Q9NWF9 866 aaPredicted RBP13.29□□□□□ -0.28
AC096543.1-201ENST00000455038 NPM3O75607 178 aaKnown RBP13.14□□□□□ -0.31
AC096543.1-201ENST00000455038 KCNA4P22459 653 aa13.13□□□□□ -0.31
AC096543.1-201ENST00000455038 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
AC096543.1-201ENST00000455038 DNAJC5BQ9UF47 199 aa12.85□□□□□ -0.35
AC096543.1-201ENST00000455038 CACNB1Q02641 598 aaPredicted RBP12.8□□□□□ -0.36
AC096543.1-201ENST00000455038 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
AC096543.1-201ENST00000455038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.69□□□□□ -0.38
AC096543.1-201ENST00000455038 C1QBPQ07021 282 aaKnown RBP12.57□□□□□ -0.4
AC096543.1-201ENST00000455038 SLC4A1APQ9BWU0 796 aaKnown RBP12.5□□□□□ -0.41
AC096543.1-201ENST00000455038 SLC4A2P04920 1241 aa12.45□□□□□ -0.42
AC096543.1-201ENST00000455038 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
AC096543.1-201ENST00000455038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
AC096543.1-201ENST00000455038 HNRNPUL2Q1KMD3 747 aaKnown RBP12.26□□□□□ -0.45
AC096543.1-201ENST00000455038 APLP2Q06481 763 aa12.21□□□□□ -0.45
AC096543.1-201ENST00000455038 FOXD4L1Q9NU39 408 aa12.21□□□□□ -0.45
AC096543.1-201ENST00000455038 MYCNP04198 464 aaPredicted RBP12.19□□□□□ -0.46
AC096543.1-201ENST00000455038 SAMD1Q6SPF0 538 aaPredicted RBP12.18□□□□□ -0.46
AC096543.1-201ENST00000455038 CAPN15O75808 1086 aa12.14□□□□□ -0.47
AC096543.1-201ENST00000455038 SPINK5Q9NQ38 1064 aaPredicted RBP12.13□□□□□ -0.47
AC096543.1-201ENST00000455038 ZBTB22O15209 634 aa12.05□□□□□ -0.48
AC096543.1-201ENST00000455038 ZNF219Q9P2Y4 722 aaPredicted RBP12.04□□□□□ -0.48
AC096543.1-201ENST00000455038 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
AC096543.1-201ENST00000455038 DSG3P32926 999 aa11.98□□□□□ -0.49
AC096543.1-201ENST00000455038 ABCB7O75027 752 aa11.85□□□□□ -0.51
AC096543.1-201ENST00000455038 ATXN8OSP0DMR3 200 aa11.84□□□□□ -0.51
AC096543.1-201ENST00000455038 NISCHQ9Y2I1 1504 aa11.81□□□□□ -0.52
AC096543.1-201ENST00000455038 EHMT2Q96KQ7 1210 aa11.8□□□□□ -0.52
AC096543.1-201ENST00000455038 ATF5Q9Y2D1 282 aaPredicted RBP11.8□□□□□ -0.52
AC096543.1-201ENST00000455038 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
AC096543.1-201ENST00000455038 POLA2Q14181 598 aa11.75□□□□□ -0.53
AC096543.1-201ENST00000455038 POTEHQ6S545 545 aa11.66□□□□□ -0.54
AC096543.1-201ENST00000455038 ZBTB12Q9Y330 459 aaPredicted RBP11.61□□□□□ -0.55
AC096543.1-201ENST00000455038 RBM42Q9BTD8 480 aaKnown RBP11.5□□□□□ -0.57
AC096543.1-201ENST00000455038 FBLN2P98095 1184 aa11.43□□□□□ -0.58
AC096543.1-201ENST00000455038 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
AC096543.1-201ENST00000455038 MKRN4PQ13434 485 aaPredicted RBP11.28□□□□□ -0.6
AC096543.1-201ENST00000455038 AKT1S1Q96B36 256 aa11.27□□□□□ -0.61
AC096543.1-201ENST00000455038 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
AC096543.1-201ENST00000455038 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
AC096543.1-201ENST00000455038 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
AC096543.1-201ENST00000455038 ZNF692Q9BU19 519 aaPredicted RBP11.15□□□□□ -0.62
AC096543.1-201ENST00000455038 REM2Q8IYK8 340 aaPredicted RBP11.13□□□□□ -0.63
AC096543.1-201ENST00000455038 SSUH2Q9Y2M2 353 aa11.09□□□□□ -0.63
AC096543.1-201ENST00000455038 CHRDL2Q6WN34 429 aa11.07□□□□□ -0.64
AC096543.1-201ENST00000455038 PITPNM1O00562 1244 aa10.99□□□□□ -0.65
AC096543.1-201ENST00000455038 SPDYE1Q8NFV5 336 aaPredicted RBP10.98□□□□□ -0.65
AC096543.1-201ENST00000455038 PABPN1Q86U42 306 aaKnown RBP eCLIP10.97□□□□□ -0.65
AC096543.1-201ENST00000455038 SPDYE4A6NLX3 237 aa10.96□□□□□ -0.65
AC096543.1-201ENST00000455038 CLEC11AQ9Y240 323 aa10.92□□□□□ -0.66
AC096543.1-201ENST00000455038 PIP4P2Q8N4L2 257 aa10.86□□□□□ -0.67
AC096543.1-201ENST00000455038 FXR2P51116 673 aaKnown RBP eCLIP10.85□□□□□ -0.67
AC096543.1-201ENST00000455038 STAG3Q9UJ98 1225 aa10.81□□□□□ -0.68
AC096543.1-201ENST00000455038 PRR29P0C7W0 189 aa10.8□□□□□ -0.68
AC096543.1-201ENST00000455038 SP7Q8TDD2 431 aaPredicted RBP10.76□□□□□ -0.69
AC096543.1-201ENST00000455038 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
AC096543.1-201ENST00000455038 PROM2Q8N271 834 aa10.73□□□□□ -0.69
AC096543.1-201ENST00000455038 FKBP8Q14318 412 aa10.7□□□□□ -0.7
AC096543.1-201ENST00000455038 CHADLQ6NUI6 762 aa10.64□□□□□ -0.71
AC096543.1-201ENST00000455038 HAX1O00165 279 aa10.61□□□□□ -0.71
AC096543.1-201ENST00000455038 CCDC180Q9P1Z9 1646 aa10.56□□□□□ -0.72
AC096543.1-201ENST00000455038 CREBZFQ9NS37 354 aa10.55□□□□□ -0.72
AC096543.1-201ENST00000455038 FARP1Q9Y4F1 1045 aaPredicted RBP10.54□□□□□ -0.72
AC096543.1-201ENST00000455038 C19orf67A6NJJ6 358 aa10.49□□□□□ -0.73
AC096543.1-201ENST00000455038 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
AC096543.1-201ENST00000455038 FBXO3Q9UK99 471 aa10.47□□□□□ -0.73
AC096543.1-201ENST00000455038 EVX2Q03828 476 aa10.46□□□□□ -0.73
AC096543.1-201ENST00000455038 NPM1P06748 294 aaKnown RBP eCLIP10.45□□□□□ -0.74
AC096543.1-201ENST00000455038 MIER1Q8N108 512 aa10.44□□□□□ -0.74
AC096543.1-201ENST00000455038 CD44P16070 742 aaKnown RBP10.41□□□□□ -0.74
AC096543.1-201ENST00000455038 PLCD3Q8N3E9 789 aa10.41□□□□□ -0.74
AC096543.1-201ENST00000455038 MNX1P50219 401 aaPredicted RBP10.39□□□□□ -0.75
AC096543.1-201ENST00000455038 PAK3O75914 559 aaPredicted RBP10.35□□□□□ -0.75
AC096543.1-201ENST00000455038 ZBTB47Q9UFB7 747 aaPredicted RBP10.35□□□□□ -0.75
AC096543.1-201ENST00000455038 CLCN6P51797 869 aa10.31□□□□□ -0.76
AC096543.1-201ENST00000455038 ZRANB1Q9UGI0 708 aa10.31□□□□□ -0.76
AC096543.1-201ENST00000455038 ABCC9O60706 1549 aa10.28□□□□□ -0.76
AC096543.1-201ENST00000455038 VASPP50552 380 aaPredicted RBP10.27□□□□□ -0.77
AC096543.1-201ENST00000455038 ZNF579Q8NAF0 562 aaKnown RBP10.27□□□□□ -0.77
AC096543.1-201ENST00000455038 GABBR2O75899 941 aa10.26□□□□□ -0.77
AC096543.1-201ENST00000455038 TSPYL2Q9H2G4 693 aaPredicted RBP10.21□□□□□ -0.77
AC096543.1-201ENST00000455038 KLHL34Q8N239 644 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms