Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TSHZ2-205ENST00000626626 670 ntBASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 AL596275.2-203ENST00000641951 371 ntBASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 AL355974.1-201ENST00000618896 1708 ntBASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC7.26□□□□□ -1.25
PCDHB11Q9Y5F2 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 OR51A10P-201ENST00000307165 937 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC023886.2-201ENST00000321285 411 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 Y_RNA.138-201ENST00000363462 102 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 MIR138-2-201ENST00000384916 84 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 MIR575-201ENST00000385013 94 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC092634.6-201ENST00000418558 192 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 RPL23AP4-201ENST00000427757 463 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 NANOGP6-201ENST00000429190 847 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC002504.1-201ENST00000438281 691 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 HMGB3P12-201ENST00000438745 556 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC132479.1-201ENST00000449160 144 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC008620.1-201ENST00000468453 592 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 RPS27P23-201ENST00000487608 251 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC139783.2-201ENST00000504847 1145 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC108120.1-201ENST00000506543 991 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 PGAM4P2-201ENST00000512491 721 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC105029.1-201ENST00000520250 669 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC022690.1-201ENST00000526681 550 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AP000790.1-201ENST00000528891 737 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 BRD9P1-201ENST00000529855 560 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 OR4C1P-201ENST00000530880 937 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 RN7SL131P-201ENST00000579043 256 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC090525.3-201ENST00000605601 189 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 CUX2P1-201ENST00000606426 298 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 U47924.1-201ENST00000606539 434 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC026634.1-201ENST00000634369 198 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC006600.2-201ENST00000624834 2506 ntBASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.25□□□□□ -1.25
PCDHB11Q9Y5F2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PCDHB11Q9Y5F2 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms