Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC2□□□□□ -2.09
MACF1Q9UPN3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 AL158163.1-201ENST00000603915 1649 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 NRBF2P3-201ENST00000432731 865 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 NOTCH2P1-201ENST00000443481 624 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 RPL23AP56-201ENST00000460778 453 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 AC139783.2-201ENST00000504847 1145 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 NPM1P41-201ENST00000512920 831 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 UQCRC2P1-201ENST00000417777 1332 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC2□□□□□ -2.09
MACF1Q9UPN3 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 ATP5F1P4-201ENST00000397288 746 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 RN7SKP17-201ENST00000411242 351 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 AL645608.4-201ENST00000423619 154 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 HMGB3P9-201ENST00000441799 583 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 VN1R48P-201ENST00000448149 1036 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 RPL12P22-201ENST00000519073 490 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 TRAV8-5-201ENST00000537369 341 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 H3F3BP2-201ENST00000583907 357 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC2□□□□□ -2.09
MACF1Q9UPN3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC2□□□□□ -2.09
MACF1Q9UPN3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 USP9YP3-201ENST00000434481 1766 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC2□□□□□ -2.09
MACF1Q9UPN3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
MACF1Q9UPN3 AL451142.1-201ENST00000375867 775 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC2□□□□□ -2.09
MACF1Q9UPN3 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC2□□□□□ -2.09
MACF1Q9UPN3 AC005252.1-201ENST00000604518 1063 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 MIR8059-201ENST00000620427 81 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 NCLP2-201ENST00000416078 1462 ntBASIC2□□□□□ -2.09
MACF1Q9UPN3 OR51H2P-202ENST00000641424 3046 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC090017.1-201ENST00000548612 1779 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 MIR7-2-201ENST00000384970 110 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 PRDX3P3-201ENST00000447765 522 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 NPM1P27-201ENST00000502784 830 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 RN7SL652P-201ENST00000577769 300 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC009237.13-201ENST00000603193 276 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 AC015967.1-201ENST00000619893 476 ntBASIC1.99□□□□□ -2.09
MACF1Q9UPN3 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
MACF1Q9UPN3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms