Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SEPT10P1-201ENST00000517342 1162 ntBASIC5.57□□□□□ -1.52
VRK1Q99986 AC023632.1-201ENST00000518463 375 ntBASIC5.57□□□□□ -1.52
VRK1Q99986 AC011853.1-201ENST00000518911 454 ntBASIC5.57□□□□□ -1.52
VRK1Q99986 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VRK1Q99986 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.57□□□□□ -1.52
VRK1Q99986 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VRK1Q99986 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK1Q99986 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VRK1Q99986 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK1Q99986 AC007494.1-201ENST00000562293 760 ntBASIC5.57□□□□□ -1.52
VRK1Q99986 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.57□□□□□ -1.52
VRK1Q99986 AC106785.4-201ENST00000569492 412 ntBASIC5.57□□□□□ -1.52
VRK1Q99986 MIR3912-201ENST00000577566 105 ntBASIC5.57□□□□□ -1.52
VRK1Q99986 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.57□□□□□ -1.52
VRK1Q99986 AC107075.1-201ENST00000613695 314 ntBASIC5.57□□□□□ -1.52
VRK1Q99986 MIR7973-1-201ENST00000614683 76 ntBASIC5.57□□□□□ -1.52
VRK1Q99986 MIR6721-201ENST00000617181 87 ntBASIC5.57□□□□□ -1.52
VRK1Q99986 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VRK1Q99986 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.57□□□□□ -1.52
VRK1Q99986 AP001052.1-201ENST00000626421 99 ntBASIC5.57□□□□□ -1.52
VRK1Q99986 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.57□□□□□ -1.52
VRK1Q99986 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.57□□□□□ -1.52
VRK1Q99986 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VRK1Q99986 LINC01613-201ENST00000561476 2780 ntBASIC5.57□□□□□ -1.52
VRK1Q99986 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VRK1Q99986 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK1Q99986 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VRK1Q99986 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VRK1Q99986 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VRK1Q99986 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.57□□□□□ -1.52
VRK1Q99986 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.57□□□□□ -1.52
VRK1Q99986 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VRK1Q99986 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VRK1Q99986 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VRK1Q99986 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.57□□□□□ -1.52
VRK1Q99986 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VRK1Q99986 AL355834.1-201ENST00000556602 3965 ntBASIC5.57□□□□□ -1.52
VRK1Q99986 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
VRK1Q99986 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
VRK1Q99986 TTC39DP-201ENST00000416781 1688 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AC010624.4-201ENST00000597606 1351 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VRK1Q99986 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK1Q99986 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.56□□□□□ -1.52
VRK1Q99986 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VRK1Q99986 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VRK1Q99986 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VRK1Q99986 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK1Q99986 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
VRK1Q99986 IGKV7-3-201ENST00000357453 298 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 RNU1-59P-201ENST00000364829 162 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 Y_RNA.465-201ENST00000384293 102 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.56□□□□□ -1.52
VRK1Q99986 SNORA11C-201ENST00000408532 129 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AL359092.1-201ENST00000417156 265 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 MRPS21P5-201ENST00000417885 231 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.56□□□□□ -1.52
VRK1Q99986 AC066692.1-201ENST00000421721 457 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 MGAT2P2-201ENST00000427194 797 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AC022022.1-201ENST00000430304 178 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.56□□□□□ -1.52
VRK1Q99986 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK1Q99986 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VRK1Q99986 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK1Q99986 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK1Q99986 UBE2D3P1-201ENST00000436669 444 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 GTF2IP7-202ENST00000436677 309 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK1Q99986 HMGB1P48-201ENST00000446155 598 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK1Q99986 AL606490.1-201ENST00000452266 765 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK1Q99986 RN7SL552P-201ENST00000462094 276 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK1Q99986 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK1Q99986 AL355032.1-201ENST00000472981 438 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 TRBV8-2-201ENST00000475637 270 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 RN7SL170P-201ENST00000487098 295 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AC106822.1-201ENST00000502647 526 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 HMGN1P16-201ENST00000508308 283 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.56□□□□□ -1.52
VRK1Q99986 CYCSP25-201ENST00000525280 316 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.56□□□□□ -1.52
VRK1Q99986 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK1Q99986 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK1Q99986 AP002373.2-201ENST00000541631 1060 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK1Q99986 AC010198.2-201ENST00000550612 259 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK1Q99986 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.56□□□□□ -1.52
VRK1Q99986 AC107958.1-201ENST00000556576 290 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.56□□□□□ -1.52
VRK1Q99986 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VRK1Q99986 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK1Q99986 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.56□□□□□ -1.52
VRK1Q99986 AC015726.1-201ENST00000602353 681 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AC004805.3-201ENST00000603178 310 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AL356986.1-201ENST00000604085 341 ntBASIC5.56□□□□□ -1.52
VRK1Q99986 AL392048.1-201ENST00000613946 534 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms