Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC011270.1-201ENST00000558606 583 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.58□□□□□ -1.68
CX3CR1P49238 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.58□□□□□ -1.68
CX3CR1P49238 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.58□□□□□ -1.68
CX3CR1P49238 SUGT1P3-202ENST00000604259 383 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 AC015982.1-201ENST00000608113 465 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 AP005212.4-201ENST00000614206 710 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 AC126175.1-201ENST00000617041 758 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
CX3CR1P49238 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 AC093591.2-201ENST00000565254 3843 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CX3CR1P49238 AC100778.3-201ENST00000580060 1750 ntBASIC4.58□□□□□ -1.68
CX3CR1P49238 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
CX3CR1P49238 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CX3CR1P49238 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CR1P49238 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CR1P49238 AC006210.2-201ENST00000367074 1545 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 SAMMSON-213ENST00000641336 1521 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.57□□□□□ -1.68
CX3CR1P49238 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
CX3CR1P49238 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CR1P49238 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CR1P49238 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CR1P49238 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CR1P49238 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CR1P49238 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CX3CR1P49238 RNU1-149P-201ENST00000390870 161 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 OR8V1P-201ENST00000395193 873 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 AL391422.1-201ENST00000402155 436 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 RNA5SP178-201ENST00000410380 128 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CR1P49238 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.57□□□□□ -1.68
CX3CR1P49238 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CR1P49238 HMGB3P10-201ENST00000434734 572 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CR1P49238 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.57□□□□□ -1.68
CX3CR1P49238 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CR1P49238 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CR1P49238 RPL7P45-201ENST00000455851 743 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 RPL7AP10-201ENST00000481016 791 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 OR11I1P-201ENST00000486033 954 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 RN7SL547P-201ENST00000490793 290 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 NIFKP7-201ENST00000503365 834 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CR1P49238 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CR1P49238 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.57□□□□□ -1.68
CX3CR1P49238 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.57□□□□□ -1.68
CX3CR1P49238 RPL10P14-201ENST00000565265 298 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CR1P49238 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CR1P49238 AC008814.1-201ENST00000603797 406 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.57□□□□□ -1.68
CX3CR1P49238 MIR6861-201ENST00000618657 64 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.57□□□□□ -1.68
CX3CR1P49238 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CR1P49238 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.57□□□□□ -1.68
CX3CR1P49238 SAMMSON-209ENST00000641222 1100 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CR1P49238 AC004817.4-201ENST00000602396 3625 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 AC097461.1-201ENST00000568928 2821 ntBASIC4.57□□□□□ -1.68
CX3CR1P49238 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CX3CR1P49238 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.57□□□□□ -1.68
CX3CR1P49238 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CX3CR1P49238 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CR1P49238 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CR1P49238 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CR1P49238 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CR1P49238 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CR1P49238 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CR1P49238 AC092747.4-201ENST00000620519 1861 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CR1P49238 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CX3CR1P49238 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CR1P49238 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CR1P49238 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CR1P49238 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CX3CR1P49238 RNU6-697P-201ENST00000363348 107 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 RNA5SP339-201ENST00000390987 122 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 HMGB3P7-201ENST00000400214 611 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CR1P49238 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.56□□□□□ -1.68
CX3CR1P49238 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.56□□□□□ -1.68
CX3CR1P49238 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CR1P49238 NANOGP4-201ENST00000427230 913 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CR1P49238 FAM96AP1-201ENST00000430879 482 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.56□□□□□ -1.68
CX3CR1P49238 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.56□□□□□ -1.68
CX3CR1P49238 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CR1P49238 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.56□□□□□ -1.68
CX3CR1P49238 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.56□□□□□ -1.68
CX3CR1P49238 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.56□□□□□ -1.68
CX3CR1P49238 BX842559.2-201ENST00000451418 605 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms