RNA–Protein interactions for RNA: ENST00000297819.3

SSMEM1-201, Transcript of serine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSMEM1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1-201ENST00000297819 AEBP2Q6ZN18 517 aaPredicted RBP23.37■■□□□ 1.33
SSMEM1-201ENST00000297819 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
SSMEM1-201ENST00000297819 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
SSMEM1-201ENST00000297819 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
SSMEM1-201ENST00000297819 FOXD1Q16676 465 aa18.71■□□□□ 0.59
SSMEM1-201ENST00000297819 PLPPR3Q6T4P5 718 aa18.18■□□□□ 0.5
SSMEM1-201ENST00000297819 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
SSMEM1-201ENST00000297819 MSH5O43196 834 aa17.71■□□□□ 0.43
SSMEM1-201ENST00000297819 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
SSMEM1-201ENST00000297819 ADRA2BP18089 450 aa17.48■□□□□ 0.39
SSMEM1-201ENST00000297819 PIAS4Q8N2W9 510 aaPredicted RBP17.39■□□□□ 0.37
SSMEM1-201ENST00000297819 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
SSMEM1-201ENST00000297819 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
SSMEM1-201ENST00000297819 PPP4R3CPQ6ZMV5 832 aa15.94■□□□□ 0.14
SSMEM1-201ENST00000297819 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
SSMEM1-201ENST00000297819 CNKSR2Q8WXI2 1034 aa15.61■□□□□ 0.09
SSMEM1-201ENST00000297819 CACNB1Q02641 598 aaPredicted RBP15.5■□□□□ 0.07
SSMEM1-201ENST00000297819 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
SSMEM1-201ENST00000297819 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
SSMEM1-201ENST00000297819 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
SSMEM1-201ENST00000297819 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
SSMEM1-201ENST00000297819 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
SSMEM1-201ENST00000297819 KCNA4P22459 653 aa15.12■□□□□ 0.01
SSMEM1-201ENST00000297819 RNF39Q9H2S5 420 aa15.07■□□□□ 0
SSMEM1-201ENST00000297819 DNAJC5BQ9UF47 199 aa14.91□□□□□ -0.02
SSMEM1-201ENST00000297819 C1QBPQ07021 282 aaKnown RBP14.83□□□□□ -0.04
SSMEM1-201ENST00000297819 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
SSMEM1-201ENST00000297819 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
SSMEM1-201ENST00000297819 U3KPZ7 1027 aaPredicted RBP14.38□□□□□ -0.11
SSMEM1-201ENST00000297819 SLC4A1APQ9BWU0 796 aaKnown RBP14.37□□□□□ -0.11
SSMEM1-201ENST00000297819 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
SSMEM1-201ENST00000297819 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
SSMEM1-201ENST00000297819 POTEHQ6S545 545 aa14.14□□□□□ -0.15
SSMEM1-201ENST00000297819 APLP2Q06481 763 aa14.12□□□□□ -0.15
SSMEM1-201ENST00000297819 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
SSMEM1-201ENST00000297819 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
SSMEM1-201ENST00000297819 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
SSMEM1-201ENST00000297819 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
SSMEM1-201ENST00000297819 CAPN15O75808 1086 aa14.04□□□□□ -0.16
SSMEM1-201ENST00000297819 DSG3P32926 999 aa13.94□□□□□ -0.18
SSMEM1-201ENST00000297819 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
SSMEM1-201ENST00000297819 ZBTB22O15209 634 aa13.88□□□□□ -0.19
SSMEM1-201ENST00000297819 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
SSMEM1-201ENST00000297819 ABCB7O75027 752 aa13.7□□□□□ -0.22
SSMEM1-201ENST00000297819 ATXN8OSP0DMR3 200 aa13.67□□□□□ -0.22
SSMEM1-201ENST00000297819 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
SSMEM1-201ENST00000297819 POLA2Q14181 598 aa13.59□□□□□ -0.23
SSMEM1-201ENST00000297819 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
SSMEM1-201ENST00000297819 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
SSMEM1-201ENST00000297819 ZBTB12Q9Y330 459 aaPredicted RBP13.42□□□□□ -0.26
SSMEM1-201ENST00000297819 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
SSMEM1-201ENST00000297819 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
SSMEM1-201ENST00000297819 FBLN2P98095 1184 aa13.19□□□□□ -0.3
SSMEM1-201ENST00000297819 OSCARQ8IYS5 282 aa13.11□□□□□ -0.31
SSMEM1-201ENST00000297819 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
SSMEM1-201ENST00000297819 MKRN4PQ13434 485 aaPredicted RBP13.05□□□□□ -0.32
SSMEM1-201ENST00000297819 SP7Q8TDD2 431 aaPredicted RBP13.01□□□□□ -0.33
SSMEM1-201ENST00000297819 SPDYE2BA6NHP3 402 aa13□□□□□ -0.33
SSMEM1-201ENST00000297819 SPDYE6P0CI01 402 aa13□□□□□ -0.33
SSMEM1-201ENST00000297819 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
SSMEM1-201ENST00000297819 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
SSMEM1-201ENST00000297819 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
SSMEM1-201ENST00000297819 SSUH2Q9Y2M2 353 aa12.83□□□□□ -0.36
SSMEM1-201ENST00000297819 PIP4P2Q8N4L2 257 aa12.79□□□□□ -0.36
SSMEM1-201ENST00000297819 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
SSMEM1-201ENST00000297819 SPDYE1Q8NFV5 336 aaPredicted RBP12.7□□□□□ -0.38
SSMEM1-201ENST00000297819 HAX1O00165 279 aa12.69□□□□□ -0.38
SSMEM1-201ENST00000297819 PABPN1Q86U42 306 aaKnown RBP eCLIP12.67□□□□□ -0.38
SSMEM1-201ENST00000297819 FXR2P51116 673 aaKnown RBP eCLIP12.66□□□□□ -0.38
SSMEM1-201ENST00000297819 SPDYE4A6NLX3 237 aa12.63□□□□□ -0.39
SSMEM1-201ENST00000297819 CLEC11AQ9Y240 323 aa12.6□□□□□ -0.39
SSMEM1-201ENST00000297819 EVX2Q03828 476 aa12.52□□□□□ -0.41
SSMEM1-201ENST00000297819 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
SSMEM1-201ENST00000297819 STAG3Q9UJ98 1225 aa12.46□□□□□ -0.41
SSMEM1-201ENST00000297819 NISCHQ9Y2I1 1504 aa12.46□□□□□ -0.42
SSMEM1-201ENST00000297819 PRKAR2AP13861 404 aaKnown RBP12.42□□□□□ -0.42
SSMEM1-201ENST00000297819 PROM2Q8N271 834 aa12.38□□□□□ -0.43
SSMEM1-201ENST00000297819 CHADLQ6NUI6 762 aa12.3□□□□□ -0.44
SSMEM1-201ENST00000297819 FKBP8Q14318 412 aa12.27□□□□□ -0.45
SSMEM1-201ENST00000297819 C19orf67A6NJJ6 358 aa12.26□□□□□ -0.45
SSMEM1-201ENST00000297819 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
SSMEM1-201ENST00000297819 GABBR2O75899 941 aa12.2□□□□□ -0.46
SSMEM1-201ENST00000297819 LHX8Q68G74 356 aa12.2□□□□□ -0.46
SSMEM1-201ENST00000297819 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
SSMEM1-201ENST00000297819 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
SSMEM1-201ENST00000297819 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
SSMEM1-201ENST00000297819 PLEKHG5O94827 1062 aa12.04□□□□□ -0.48
SSMEM1-201ENST00000297819 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
SSMEM1-201ENST00000297819 MIER1Q8N108 512 aa12.02□□□□□ -0.49
SSMEM1-201ENST00000297819 FBXO3Q9UK99 471 aa12.02□□□□□ -0.49
SSMEM1-201ENST00000297819 CLCN6P51797 869 aa11.96□□□□□ -0.49
SSMEM1-201ENST00000297819 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
SSMEM1-201ENST00000297819 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
SSMEM1-201ENST00000297819 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
SSMEM1-201ENST00000297819 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
SSMEM1-201ENST00000297819 ZRANB1Q9UGI0 708 aa11.92□□□□□ -0.5
SSMEM1-201ENST00000297819 ZNF579Q8NAF0 562 aaKnown RBP11.9□□□□□ -0.5
SSMEM1-201ENST00000297819 VASPP50552 380 aaPredicted RBP11.81□□□□□ -0.52
SSMEM1-201ENST00000297819 PLSCR2Q9NRY7 297 aa11.79□□□□□ -0.52
SSMEM1-201ENST00000297819 TSPYL2Q9H2G4 693 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms