Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 NOTCH2P1-201ENST00000443481 624 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC8.54□□□□□ -1.04
NUBP1P53384 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC8.54□□□□□ -1.04
NUBP1P53384 RPL21P42-201ENST00000488408 464 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 RPL17P19-201ENST00000489069 552 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 RN7SL864P-201ENST00000493457 285 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 RNU6-897P-201ENST00000517135 105 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 HMGN1P28-201ENST00000521340 364 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 FAM60DP-201ENST00000524174 632 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC8.54□□□□□ -1.04
NUBP1P53384 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC8.54□□□□□ -1.04
NUBP1P53384 RANP3-201ENST00000530970 276 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC8.54□□□□□ -1.04
NUBP1P53384 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC8.54□□□□□ -1.04
NUBP1P53384 AC090517.1-201ENST00000569307 266 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 RN7SL785P-201ENST00000578437 253 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 AL136985.2-201ENST00000607372 535 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 SDR42E1P1-201ENST00000611327 477 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC8.54□□□□□ -1.04
NUBP1P53384 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
NUBP1P53384 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
NUBP1P53384 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.54□□□□□ -1.04
NUBP1P53384 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 RBFOX1-202ENST00000340209 4099 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC8.54□□□□□ -1.04
NUBP1P53384 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 ZNF72P-201ENST00000425869 1908 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC8.54□□□□□ -1.04
NUBP1P53384 PHTF2-205ENST00000416283 5198 ntTSL 5 BASIC8.54□□□□□ -1.04
NUBP1P53384 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 AL590132.1-201ENST00000639602 4455 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
NUBP1P53384 INTS3-210ENST00000512605 3442 ntTSL 2 BASIC8.54□□□□□ -1.04
NUBP1P53384 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC8.54□□□□□ -1.04
NUBP1P53384 AC005005.3-201ENST00000609017 1410 ntBASIC8.54□□□□□ -1.04
NUBP1P53384 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
NUBP1P53384 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
NUBP1P53384 TSHZ1-201ENST00000322038 4992 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 AP000446.1-201ENST00000530045 2643 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 ADGRG1-201ENST00000388813 3925 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 STEAP3-201ENST00000393106 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 TNS1-202ENST00000310858 1792 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 AL513548.3-201ENST00000611708 2865 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
NUBP1P53384 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
NUBP1P53384 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 TRAF1-202ENST00000540010 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 GUCY1B3-201ENST00000264424 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 SART3-201ENST00000228284 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 Y_RNA.65-201ENST00000362846 100 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 RNU4-42P-201ENST00000364738 142 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC8.53□□□□□ -1.04
NUBP1P53384 Y_RNA.399-201ENST00000383955 105 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 RNU6-214P-201ENST00000384130 107 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 SNORA51.11-201ENST00000384442 131 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 RNA5SP297-201ENST00000391029 113 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 PRRC2CP1-201ENST00000404428 159 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 RNU6-1140P-201ENST00000410517 106 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 AC126124.1-201ENST00000426104 185 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 AL133396.1-201ENST00000432048 687 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 AL353803.3-201ENST00000444641 335 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 OR7H1P-201ENST00000448965 922 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC8.53□□□□□ -1.04
NUBP1P53384 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 AC097486.1-201ENST00000515331 210 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 RNU6-397P-201ENST00000516226 104 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 REG4-204ENST00000530654 612 ntTSL 5 BASIC8.53□□□□□ -1.04
NUBP1P53384 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC8.53□□□□□ -1.04
NUBP1P53384 DYNLL1P4-201ENST00000549314 266 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 AC009779.8-202ENST00000607990 932 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 AL596245.1-201ENST00000618994 362 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.53□□□□□ -1.04
NUBP1P53384 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC8.53□□□□□ -1.04
NUBP1P53384 AC091953.5-201ENST00000622919 233 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 ATP8A2-201ENST00000255283 3287 ntTSL 5 BASIC8.53□□□□□ -1.04
NUBP1P53384 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
NUBP1P53384 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC8.53□□□□□ -1.04
NUBP1P53384 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 TRIM55-201ENST00000276573 1960 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
NUBP1P53384 SMPD4-201ENST00000351288 3661 ntTSL 2 BASIC8.53□□□□□ -1.04
NUBP1P53384 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC8.53□□□□□ -1.04
NUBP1P53384 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
NUBP1P53384 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC8.53□□□□□ -1.04
NUBP1P53384 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
NUBP1P53384 RBPJP2-201ENST00000618187 1444 ntBASIC8.53□□□□□ -1.04
NUBP1P53384 FKBP5-204ENST00000542713 7384 ntTSL 2 BASIC8.53□□□□□ -1.04
NUBP1P53384 CFAP44-201ENST00000295868 3377 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms