RNA–Protein interactions for RNA: ENST00000637689.1

LGI1-228, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 5 BASIC

Gene LGI1, Length 1,802 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-228ENST00000637689 AEBP2Q6ZN18 517 aaPredicted RBP15.2■□□□□ 0.02
LGI1-228ENST00000637689 CHIC1Q5VXU3 224 aa15.05■□□□□ -0
LGI1-228ENST00000637689 POTEDQ86YR6 584 aa13.26□□□□□ -0.29
LGI1-228ENST00000637689 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
LGI1-228ENST00000637689 SENP3Q9H4L4 574 aaPredicted RBP13.16□□□□□ -0.3
LGI1-228ENST00000637689 PLPPR3Q6T4P5 718 aa12.57□□□□□ -0.4
LGI1-228ENST00000637689 FOXD1Q16676 465 aa12.35□□□□□ -0.43
LGI1-228ENST00000637689 MSH5O43196 834 aa11.96□□□□□ -0.49
LGI1-228ENST00000637689 ADRA2BP18089 450 aa11.66□□□□□ -0.54
LGI1-228ENST00000637689 EHMT2Q96KQ7 1210 aa11.62□□□□□ -0.55
LGI1-228ENST00000637689 KCNA4P22459 653 aa11.56□□□□□ -0.56
LGI1-228ENST00000637689 PPP6R1Q9UPN7 881 aa11.49□□□□□ -0.57
LGI1-228ENST00000637689 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
LGI1-228ENST00000637689 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
LGI1-228ENST00000637689 PPP4R3CPQ6ZMV5 832 aa11.12□□□□□ -0.63
LGI1-228ENST00000637689 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
LGI1-228ENST00000637689 CSRNP3Q8WYN3 585 aa11.09□□□□□ -0.63
LGI1-228ENST00000637689 NPM3O75607 178 aaKnown RBP10.84□□□□□ -0.67
LGI1-228ENST00000637689 CACNB1Q02641 598 aaPredicted RBP10.84□□□□□ -0.67
LGI1-228ENST00000637689 CNKSR2Q8WXI2 1034 aa10.69□□□□□ -0.7
LGI1-228ENST00000637689 SCAF1Q9H7N4 1312 aaKnown RBP10.69□□□□□ -0.7
LGI1-228ENST00000637689 ZBTB22O15209 634 aa10.6□□□□□ -0.71
LGI1-228ENST00000637689 FOXD4L1Q9NU39 408 aa10.5□□□□□ -0.73
LGI1-228ENST00000637689 DNAJC5BQ9UF47 199 aa10.37□□□□□ -0.75
LGI1-228ENST00000637689 SLC24A1O60721 1099 aa10.35□□□□□ -0.75
LGI1-228ENST00000637689 AMER1Q5JTC6 1135 aaPredicted RBP10.31□□□□□ -0.76
LGI1-228ENST00000637689 RNF216Q9NWF9 866 aaPredicted RBP10.3□□□□□ -0.76
LGI1-228ENST00000637689 MAPK8IP2Q13387 824 aaPredicted RBP10.28□□□□□ -0.76
LGI1-228ENST00000637689 DMRT2Q9Y5R5 561 aa10.27□□□□□ -0.77
LGI1-228ENST00000637689 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
LGI1-228ENST00000637689 POTEHQ6S545 545 aa10.21□□□□□ -0.77
LGI1-228ENST00000637689 RNF39Q9H2S5 420 aa10.1□□□□□ -0.79
LGI1-228ENST00000637689 ATXN8OSP0DMR3 200 aa10.07□□□□□ -0.8
LGI1-228ENST00000637689 HOXD11P31277 338 aaPredicted RBP10.06□□□□□ -0.8
LGI1-228ENST00000637689 FKBP8Q14318 412 aa10.06□□□□□ -0.8
LGI1-228ENST00000637689 MYCNP04198 464 aaPredicted RBP10.05□□□□□ -0.8
LGI1-228ENST00000637689 SLC4A2P04920 1241 aa10.03□□□□□ -0.8
LGI1-228ENST00000637689 C1QBPQ07021 282 aaKnown RBP9.91□□□□□ -0.82
LGI1-228ENST00000637689 DCAF8L1A6NGE4 600 aa9.89□□□□□ -0.83
LGI1-228ENST00000637689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.73□□□□□ -0.85
LGI1-228ENST00000637689 HNRNPUL2Q1KMD3 747 aaKnown RBP9.73□□□□□ -0.85
LGI1-228ENST00000637689 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
LGI1-228ENST00000637689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.7□□□□□ -0.86
LGI1-228ENST00000637689 ATF5Q9Y2D1 282 aaPredicted RBP9.64□□□□□ -0.87
LGI1-228ENST00000637689 FBXO3Q9UK99 471 aa9.59□□□□□ -0.88
LGI1-228ENST00000637689 U3KPZ7 1027 aaPredicted RBP9.52□□□□□ -0.89
LGI1-228ENST00000637689 APLP2Q06481 763 aa9.5□□□□□ -0.89
LGI1-228ENST00000637689 ZNF219Q9P2Y4 722 aaPredicted RBP9.49□□□□□ -0.89
LGI1-228ENST00000637689 PLCB2Q00722 1185 aa9.46□□□□□ -0.9
LGI1-228ENST00000637689 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
LGI1-228ENST00000637689 DCAF8L2P0C7V8 631 aa9.42□□□□□ -0.9
LGI1-228ENST00000637689 HAP1P54257 671 aaPredicted RBP9.38□□□□□ -0.91
LGI1-228ENST00000637689 VASPP50552 380 aaPredicted RBP9.37□□□□□ -0.91
LGI1-228ENST00000637689 FBLN2P98095 1184 aa9.33□□□□□ -0.92
LGI1-228ENST00000637689 BCANQ96GW7 911 aa9.3□□□□□ -0.92
LGI1-228ENST00000637689 PROM2Q8N271 834 aa9.28□□□□□ -0.92
LGI1-228ENST00000637689 MKRN4PQ13434 485 aaPredicted RBP9.26□□□□□ -0.93
LGI1-228ENST00000637689 IFNLR1Q8IU57 520 aaPredicted RBP9.25□□□□□ -0.93
LGI1-228ENST00000637689 VSIG10Q8N0Z9 540 aa9.21□□□□□ -0.93
LGI1-228ENST00000637689 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.19□□□□□ -0.94
LGI1-228ENST00000637689 TRHP20396 242 aaPredicted RBP9.19□□□□□ -0.94
LGI1-228ENST00000637689 PKD2Q13563 968 aa9.17□□□□□ -0.94
LGI1-228ENST00000637689 POLA2Q14181 598 aa9.15□□□□□ -0.94
LGI1-228ENST00000637689 KLHL34Q8N239 644 aa9.15□□□□□ -0.95
LGI1-228ENST00000637689 DSG3P32926 999 aa9.13□□□□□ -0.95
LGI1-228ENST00000637689 SP7Q8TDD2 431 aaPredicted RBP9.13□□□□□ -0.95
LGI1-228ENST00000637689 TAOK2Q9UL54 1235 aa9.12□□□□□ -0.95
LGI1-228ENST00000637689 BBXQ8WY36 941 aaPredicted RBP9.11□□□□□ -0.95
LGI1-228ENST00000637689 SPOCK2Q92563 424 aa9.1□□□□□ -0.95
LGI1-228ENST00000637689 ZBTB12Q9Y330 459 aaPredicted RBP9.1□□□□□ -0.95
LGI1-228ENST00000637689 ECM2O94769 699 aaPredicted RBP9.1□□□□□ -0.95
LGI1-228ENST00000637689 PRKCSHP14314 528 aaPredicted RBP9.1□□□□□ -0.95
LGI1-228ENST00000637689 CAPN15O75808 1086 aa9.09□□□□□ -0.95
LGI1-228ENST00000637689 SPINK5Q9NQ38 1064 aaPredicted RBP9.07□□□□□ -0.96
LGI1-228ENST00000637689 PAXIP1Q6ZW49 1069 aaPredicted RBP9.06□□□□□ -0.96
LGI1-228ENST00000637689 CFAP44Q96MT7 982 aa9.06□□□□□ -0.96
LGI1-228ENST00000637689 STAG3Q9UJ98 1225 aa9.02□□□□□ -0.97
LGI1-228ENST00000637689 PLCD3Q8N3E9 789 aa9.01□□□□□ -0.97
LGI1-228ENST00000637689 TPRNQ4KMQ1 711 aa9.01□□□□□ -0.97
LGI1-228ENST00000637689 KDM2AQ9Y2K7 1162 aa8.98□□□□□ -0.97
LGI1-228ENST00000637689 SPRYD3Q8NCJ5 442 aa8.98□□□□□ -0.97
LGI1-228ENST00000637689 NPM1P06748 294 aaKnown RBP eCLIP8.96□□□□□ -0.98
LGI1-228ENST00000637689 ZNF692Q9BU19 519 aaPredicted RBP8.96□□□□□ -0.98
LGI1-228ENST00000637689 ABCB7O75027 752 aa8.93□□□□□ -0.98
LGI1-228ENST00000637689 CHRDL2Q6WN34 429 aa8.93□□□□□ -0.98
LGI1-228ENST00000637689 MIER1Q8N108 512 aa8.93□□□□□ -0.98
LGI1-228ENST00000637689 RGL2O15211 777 aa8.92□□□□□ -0.98
LGI1-228ENST00000637689 PLEKHG5O94827 1062 aa8.92□□□□□ -0.98
LGI1-228ENST00000637689 ZBTB47Q9UFB7 747 aaPredicted RBP8.89□□□□□ -0.99
LGI1-228ENST00000637689 CIZ1Q9ULV3 898 aaPredicted RBP8.89□□□□□ -0.99
LGI1-228ENST00000637689 CHGAP10645 457 aaKnown RBP8.88□□□□□ -0.99
LGI1-228ENST00000637689 TSHZ2Q9NRE2 1034 aa8.87□□□□□ -0.99
LGI1-228ENST00000637689 SPDYE2BA6NHP3 402 aa8.87□□□□□ -0.99
LGI1-228ENST00000637689 SPDYE6P0CI01 402 aa8.87□□□□□ -0.99
LGI1-228ENST00000637689 SPDYE2Q495Y8 402 aa8.87□□□□□ -0.99
LGI1-228ENST00000637689 NBR1Q14596 966 aa8.86□□□□□ -0.99
LGI1-228ENST00000637689 PABPN1Q86U42 306 aaKnown RBP eCLIP8.84□□□□□ -0.99
LGI1-228ENST00000637689 TRIM41Q8WV44 630 aa8.82□□□□□ -1
LGI1-228ENST00000637689 OSCARQ8IYS5 282 aa8.81□□□□□ -1
LGI1-228ENST00000637689 PLSCR2Q9NRY7 297 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms