Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL3P19876 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL3P19876 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL3P19876 AC091046.3-201ENST00000631455 1574 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
CXCL3P19876 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CXCL3P19876 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL3P19876 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL3P19876 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL3P19876 RNA5SP273-201ENST00000362484 113 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 RNA5SP477-201ENST00000362639 119 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 RNU1-146P-201ENST00000364015 165 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL3P19876 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.23□□□□□ -1.73
CXCL3P19876 RPL21P108-201ENST00000413857 481 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL3P19876 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL3P19876 SLC35E1P1-201ENST00000419313 864 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL3P19876 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.23□□□□□ -1.73
CXCL3P19876 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.23□□□□□ -1.73
CXCL3P19876 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.23□□□□□ -1.73
CXCL3P19876 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.23□□□□□ -1.73
CXCL3P19876 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL3P19876 MRPL48P1-201ENST00000445390 636 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 TDGF1P1-201ENST00000445734 527 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AC002553.2-201ENST00000453217 340 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL3P19876 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL3P19876 AC118758.1-202ENST00000454719 225 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AC104339.1-201ENST00000465478 348 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AC098583.1-201ENST00000480875 255 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 OR5H7P-201ENST00000514084 930 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL3P19876 RNA5SP438-201ENST00000516561 112 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL3P19876 AP000648.1-201ENST00000529682 397 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL3P19876 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.23□□□□□ -1.73
CXCL3P19876 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL3P19876 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL3P19876 MIR744-201ENST00000578242 98 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AC005252.1-201ENST00000604518 1063 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AL031601.1-201ENST00000605702 394 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AL359091.2-201ENST00000609303 556 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AC129778.1-202ENST00000623812 261 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AL591379.1-207ENST00000635982 261 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 AC138627.1-204ENST00000641894 765 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL3P19876 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CXCL3P19876 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL3P19876 LINC01963-201ENST00000562038 3148 ntBASIC4.23□□□□□ -1.73
CXCL3P19876 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
CXCL3P19876 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL3P19876 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL3P19876 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL3P19876 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL3P19876 DDX18P5-201ENST00000534547 1306 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CXCL3P19876 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CXCL3P19876 SRRM1P3-201ENST00000426911 2678 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 AC093775.1-201ENST00000624154 1868 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.22□□□□□ -1.73
CXCL3P19876 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL3P19876 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL3P19876 RNU1-150P-201ENST00000362491 162 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL3P19876 SUGT1P2-201ENST00000379452 992 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL3P19876 MIR1203-201ENST00000408812 85 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 QRSL1P2-201ENST00000418582 964 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 OR2X1P-201ENST00000421144 687 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 AL035660.1-201ENST00000422041 222 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 GTF2IP2-201ENST00000424290 697 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.22□□□□□ -1.73
CXCL3P19876 GAPDHP34-201ENST00000432112 823 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 GSTM5P1-201ENST00000434751 660 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 RPS23P6-201ENST00000466136 431 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 NENFP3-201ENST00000503735 313 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 AC025458.1-201ENST00000506046 166 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 SCARNA16.4-201ENST00000516956 187 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 AP002981.1-201ENST00000517692 975 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL3P19876 AC027369.2-201ENST00000528030 440 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 HMGB1P42-201ENST00000532126 553 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.22□□□□□ -1.73
CXCL3P19876 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CXCL3P19876 AC006512.2-201ENST00000543250 486 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL3P19876 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL3P19876 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL3P19876 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.22□□□□□ -1.73
CXCL3P19876 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL3P19876 ATP5J2P6-201ENST00000565203 266 ntBASIC4.22□□□□□ -1.73
CXCL3P19876 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL3P19876 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL3P19876 AL591926.1-201ENST00000620542 217 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms