Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.03□□□□□ -1.76
IFNA1P01562 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.03□□□□□ -1.76
IFNA1P01562 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
IFNA1P01562 DDX18P5-201ENST00000534547 1306 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
IFNA1P01562 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.03□□□□□ -1.76
IFNA1P01562 OR10J6P-201ENST00000289731 930 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
IFNA1P01562 AL592291.1-201ENST00000403830 352 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 NCSTNP1-201ENST00000406229 144 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 RNA5SP146-201ENST00000410743 123 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 SEPT7P8-201ENST00000413308 775 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.03□□□□□ -1.76
IFNA1P01562 CKS1BP6-201ENST00000424932 240 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 RPL5P7-201ENST00000444235 813 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.03□□□□□ -1.76
IFNA1P01562 HMGB1P7-201ENST00000450921 612 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.03□□□□□ -1.76
IFNA1P01562 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.03□□□□□ -1.76
IFNA1P01562 AL133244.1-201ENST00000456007 258 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.03□□□□□ -1.76
IFNA1P01562 RPL7P40-201ENST00000481703 745 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 HMGB1P44-201ENST00000508597 572 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.03□□□□□ -1.76
IFNA1P01562 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.03□□□□□ -1.76
IFNA1P01562 AC011270.1-201ENST00000558606 583 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.03□□□□□ -1.76
IFNA1P01562 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.03□□□□□ -1.76
IFNA1P01562 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.03□□□□□ -1.76
IFNA1P01562 AL049829.3-202ENST00000604278 711 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 uc_338.18-201ENST00000615451 175 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 BMS1P21-201ENST00000634565 365 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
IFNA1P01562 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
IFNA1P01562 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.03□□□□□ -1.76
IFNA1P01562 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
IFNA1P01562 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
IFNA1P01562 LINC01109-201ENST00000603837 3081 ntBASIC4.03□□□□□ -1.76
IFNA1P01562 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.03□□□□□ -1.77
IFNA1P01562 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
IFNA1P01562 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.02□□□□□ -1.77
IFNA1P01562 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
IFNA1P01562 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.02□□□□□ -1.77
IFNA1P01562 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
IFNA1P01562 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.02□□□□□ -1.77
IFNA1P01562 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
IFNA1P01562 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.02□□□□□ -1.77
IFNA1P01562 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
IFNA1P01562 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
IFNA1P01562 RNU1-94P-201ENST00000362627 173 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.02□□□□□ -1.77
IFNA1P01562 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
IFNA1P01562 AL512422.1-201ENST00000407033 553 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 CYCSP10-201ENST00000417973 294 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 SLC35E1P1-201ENST00000419313 864 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.02□□□□□ -1.77
IFNA1P01562 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.02□□□□□ -1.77
IFNA1P01562 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.02□□□□□ -1.77
IFNA1P01562 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.02□□□□□ -1.77
IFNA1P01562 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.02□□□□□ -1.77
IFNA1P01562 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.02□□□□□ -1.77
IFNA1P01562 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.02□□□□□ -1.77
IFNA1P01562 Z80107.2-201ENST00000445127 392 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.02□□□□□ -1.77
IFNA1P01562 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
IFNA1P01562 RHEBP2-201ENST00000450289 600 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.02□□□□□ -1.77
IFNA1P01562 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.02□□□□□ -1.77
IFNA1P01562 PGBD4P4-201ENST00000509673 613 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 snoU109.6-201ENST00000516831 118 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.02□□□□□ -1.77
IFNA1P01562 HMGB1P42-201ENST00000532126 553 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 AC005868.1-201ENST00000536421 331 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.02□□□□□ -1.77
IFNA1P01562 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.02□□□□□ -1.77
IFNA1P01562 AC116553.2-201ENST00000564203 463 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
IFNA1P01562 RN7SL176P-201ENST00000580352 264 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 RN7SL66P-201ENST00000582099 264 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 PPATP2-201ENST00000605635 508 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.02□□□□□ -1.77
IFNA1P01562 AC012676.3-201ENST00000614983 479 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 AL356752.1-201ENST00000615844 593 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.02□□□□□ -1.77
IFNA1P01562 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
IFNA1P01562 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
IFNA1P01562 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
IFNA1P01562 AC090971.4-201ENST00000560291 1800 ntBASIC4.02□□□□□ -1.77
IFNA1P01562 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
IFNA1P01562 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
IFNA1P01562 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
IFNA1P01562 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
IFNA1P01562 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
IFNA1P01562 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
IFNA1P01562 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.01□□□□□ -1.77
IFNA1P01562 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
IFNA1P01562 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.01□□□□□ -1.77
IFNA1P01562 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
IFNA1P01562 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
IFNA1P01562 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 399.9 ms