RNA–Protein interactions for RNA: ENST00000556740.5

MLH3-212, Transcript of mutL homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MLH3, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-212ENST00000556740 NISCHQ9Y2I1 1504 aa8.53□□□□□ -1.04
MLH3-212ENST00000556740 DCAF8L2P0C7V8 631 aa7.94□□□□□ -1.14
MLH3-212ENST00000556740 SHROOM4Q9ULL8 1493 aa7.87□□□□□ -1.15
MLH3-212ENST00000556740 SUPT5HO00267 1087 aaKnown RBP7.85□□□□□ -1.15
MLH3-212ENST00000556740 EHMT2Q96KQ7 1210 aa7.44□□□□□ -1.22
MLH3-212ENST00000556740 PCGF6Q9BYE7 350 aa7.41□□□□□ -1.22
MLH3-212ENST00000556740 FAM9AQ8IZU1 332 aaPredicted RBP7.34□□□□□ -1.23
MLH3-212ENST00000556740 CHIC1Q5VXU3 224 aa7.29□□□□□ -1.24
MLH3-212ENST00000556740 TRIM41Q8WV44 630 aa7.23□□□□□ -1.25
MLH3-212ENST00000556740 LOC105371045A0A1W2PR82 267 aa7.22□□□□□ -1.25
MLH3-212ENST00000556740 HRCP23327 699 aa7.21□□□□□ -1.26
MLH3-212ENST00000556740 TTBK1Q5TCY1 1321 aaPredicted RBP7.2□□□□□ -1.26
MLH3-212ENST00000556740 ZCCHC6Q5VYS8 1495 aaKnown RBP7.15□□□□□ -1.26
MLH3-212ENST00000556740 PPARGC1BQ86YN6 1023 aaKnown RBP7.14□□□□□ -1.27
MLH3-212ENST00000556740 TRIM26Q12899 539 aaPredicted RBP7.11□□□□□ -1.27
MLH3-212ENST00000556740 ZEB1P37275 1124 aaPredicted RBP7.07□□□□□ -1.28
MLH3-212ENST00000556740 CCER1Q8TC90 406 aaPredicted RBP7.06□□□□□ -1.28
MLH3-212ENST00000556740 CCDC180Q9P1Z9 1646 aa7.05□□□□□ -1.28
MLH3-212ENST00000556740 RANGAP1P46060 587 aaPredicted RBP7.04□□□□□ -1.28
MLH3-212ENST00000556740 MYO15BQ96JP2 1530 aa7.04□□□□□ -1.28
MLH3-212ENST00000556740 APLP2Q06481 763 aa7.02□□□□□ -1.29
MLH3-212ENST00000556740 UBTFP17480 764 aaKnown RBP7.02□□□□□ -1.29
MLH3-212ENST00000556740 ABCC9O60706 1549 aa7.01□□□□□ -1.29
MLH3-212ENST00000556740 SCRIBQ14160 1630 aa6.95□□□□□ -1.3
MLH3-212ENST00000556740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.93□□□□□ -1.3
MLH3-212ENST00000556740 CENPBP07199 599 aaPredicted RBP6.91□□□□□ -1.3
MLH3-212ENST00000556740 DCAF1Q9Y4B6 1507 aa6.91□□□□□ -1.3
MLH3-212ENST00000556740 YTHDC1Q96MU7 727 aaKnown RBP6.89□□□□□ -1.31
MLH3-212ENST00000556740 HNRNPUL2Q1KMD3 747 aaKnown RBP6.86□□□□□ -1.31
MLH3-212ENST00000556740 PABPN1Q86U42 306 aaKnown RBP eCLIP6.86□□□□□ -1.31
MLH3-212ENST00000556740 RSF1Q96T23 1441 aaPredicted RBP6.83□□□□□ -1.32
MLH3-212ENST00000556740 ATP1B4Q9UN42 357 aaPredicted RBP6.82□□□□□ -1.32
MLH3-212ENST00000556740 DIEXFQ68CQ4 756 aaKnown RBP6.8□□□□□ -1.32
MLH3-212ENST00000556740 PELP1Q8IZL8 1130 aaKnown RBP6.8□□□□□ -1.32
MLH3-212ENST00000556740 ITGAEP38570 1179 aa6.79□□□□□ -1.32
MLH3-212ENST00000556740 CSRNP3Q8WYN3 585 aa6.75□□□□□ -1.33
MLH3-212ENST00000556740 RB1CC1Q8TDY2 1594 aa6.74□□□□□ -1.33
MLH3-212ENST00000556740 CECR2Q9BXF3 1484 aa6.73□□□□□ -1.33
MLH3-212ENST00000556740 GTF3C3Q9Y5Q9 886 aa6.7□□□□□ -1.34
MLH3-212ENST00000556740 SLC24A1O60721 1099 aa6.69□□□□□ -1.34
MLH3-212ENST00000556740 NACADO15069 1562 aa6.67□□□□□ -1.34
MLH3-212ENST00000556740 ACIN1Q9UKV3 1341 aaKnown RBP6.67□□□□□ -1.34
MLH3-212ENST00000556740 ZNF316A6NFI3 1004 aaPredicted RBP6.67□□□□□ -1.34
MLH3-212ENST00000556740 MROH2BQ7Z745 1585 aa6.66□□□□□ -1.34
MLH3-212ENST00000556740 SCAF1Q9H7N4 1312 aaKnown RBP6.65□□□□□ -1.34
MLH3-212ENST00000556740 CEP162Q5TB80 1403 aa6.65□□□□□ -1.35
MLH3-212ENST00000556740 NEUROD1Q13562 356 aa6.63□□□□□ -1.35
MLH3-212ENST00000556740 FAM50AQ14320 339 aaKnown RBP6.62□□□□□ -1.35
MLH3-212ENST00000556740 NEFLP07196 543 aa6.62□□□□□ -1.35
MLH3-212ENST00000556740 BAZ1AQ9NRL2 1556 aaPredicted RBP6.61□□□□□ -1.35
MLH3-212ENST00000556740 WIZO95785 1651 aa6.61□□□□□ -1.35
MLH3-212ENST00000556740 ABCC8Q09428 1581 aa6.6□□□□□ -1.35
MLH3-212ENST00000556740 SOGA1O94964 1423 aa6.59□□□□□ -1.35
MLH3-212ENST00000556740 CLIP1P30622 1438 aa6.59□□□□□ -1.35
MLH3-212ENST00000556740 P3H3Q8IVL6 736 aa6.58□□□□□ -1.36
MLH3-212ENST00000556740 WRNQ14191 1432 aaPredicted RBP eCLIP6.58□□□□□ -1.36
MLH3-212ENST00000556740 GOLGA3Q08378 1498 aa6.58□□□□□ -1.36
MLH3-212ENST00000556740 CCDC88BA6NC98 1476 aa6.57□□□□□ -1.36
MLH3-212ENST00000556740 TNIKQ9UKE5 1360 aa6.57□□□□□ -1.36
MLH3-212ENST00000556740 EEA1Q15075 1411 aa6.56□□□□□ -1.36
MLH3-212ENST00000556740 MIER1Q8N108 512 aa6.55□□□□□ -1.36
MLH3-212ENST00000556740 CNGB1Q14028 1251 aaPredicted RBP6.54□□□□□ -1.36
MLH3-212ENST00000556740 BCANQ96GW7 911 aa6.54□□□□□ -1.36
MLH3-212ENST00000556740 ERICH6Q7L0X2 663 aa6.53□□□□□ -1.36
MLH3-212ENST00000556740 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.36
MLH3-212ENST00000556740 BAZ1BQ9UIG0 1483 aaKnown RBP6.52□□□□□ -1.37
MLH3-212ENST00000556740 MYT1Q01538 1121 aa6.52□□□□□ -1.37
MLH3-212ENST00000556740 CEP164Q9UPV0 1460 aa6.52□□□□□ -1.37
MLH3-212ENST00000556740 FBLN2P98095 1184 aa6.5□□□□□ -1.37
MLH3-212ENST00000556740 TOP2AP11388 1531 aaKnown RBP6.5□□□□□ -1.37
MLH3-212ENST00000556740 TRIM52Q96A61 297 aa6.49□□□□□ -1.37
MLH3-212ENST00000556740 ARID3CA6NKF2 412 aa6.49□□□□□ -1.37
MLH3-212ENST00000556740 RUSC2Q8N2Y8 1516 aa6.48□□□□□ -1.37
MLH3-212ENST00000556740 MYT1LQ9UL68 1186 aa6.48□□□□□ -1.37
MLH3-212ENST00000556740 ANP32CO43423 234 aa6.46□□□□□ -1.37
MLH3-212ENST00000556740 SMARCA4P51532 1647 aa6.46□□□□□ -1.37
MLH3-212ENST00000556740 DDX10Q13206 875 aaKnown RBP6.46□□□□□ -1.37
MLH3-212ENST00000556740 HIRIP3Q9BW71 556 aaPredicted RBP6.45□□□□□ -1.38
MLH3-212ENST00000556740 VPS8Q8N3P4 1428 aa6.45□□□□□ -1.38
MLH3-212ENST00000556740 NPM1P06748 294 aaKnown RBP eCLIP6.44□□□□□ -1.38
MLH3-212ENST00000556740 KIF27Q86VH2 1401 aa6.43□□□□□ -1.38
MLH3-212ENST00000556740 SMARCA2P51531 1590 aa6.42□□□□□ -1.38
MLH3-212ENST00000556740 ZNF326Q5BKZ1 582 aaKnown RBP6.42□□□□□ -1.38
MLH3-212ENST00000556740 AEBP2Q6ZN18 517 aaPredicted RBP6.42□□□□□ -1.38
MLH3-212ENST00000556740 TONSLQ96HA7 1378 aa6.42□□□□□ -1.38
MLH3-212ENST00000556740 KANK4Q5T7N3 995 aaPredicted RBP6.42□□□□□ -1.38
MLH3-212ENST00000556740 TRHP20396 242 aaPredicted RBP6.41□□□□□ -1.38
MLH3-212ENST00000556740 ERCC6Q03468 1493 aa6.41□□□□□ -1.38
MLH3-212ENST00000556740 RAPGEF2Q9Y4G8 1499 aa6.41□□□□□ -1.38
MLH3-212ENST00000556740 FKBP8Q14318 412 aa6.41□□□□□ -1.38
MLH3-212ENST00000556740 CHIC2Q9UKJ5 165 aa6.4□□□□□ -1.39
MLH3-212ENST00000556740 MTUS2Q5JR59 1369 aa6.39□□□□□ -1.39
MLH3-212ENST00000556740 CCNB3Q8WWL7 1395 aa6.38□□□□□ -1.39
MLH3-212ENST00000556740 SIN3AQ96ST3 1273 aa6.38□□□□□ -1.39
MLH3-212ENST00000556740 CUX2O14529 1486 aa6.37□□□□□ -1.39
MLH3-212ENST00000556740 ATAD2BQ9ULI0 1458 aa6.37□□□□□ -1.39
MLH3-212ENST00000556740 CLSPNQ9HAW4 1339 aa6.37□□□□□ -1.39
MLH3-212ENST00000556740 HNRNPUQ00839 825 aaKnown RBP eCLIP6.37□□□□□ -1.39
MLH3-212ENST00000556740 ZNF777Q9ULD5 760 aaPredicted RBP6.36□□□□□ -1.39
MLH3-212ENST00000556740 RRP7BPQ9NSQ0 103 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms