Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL163540.1-201ENST00000485382 386 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 AC104687.1-201ENST00000485829 412 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 AC079594.1-201ENST00000489757 331 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 FTH1P23-201ENST00000492727 550 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC7.04□□□□□ -1.28
RNF144AP50876 POU5F1P7-201ENST00000508759 541 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 AC023794.3-204ENST00000510754 236 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 SCARNA20.1-201ENST00000516009 138 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 RNU6-1004P-201ENST00000516584 111 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF144AP50876 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF144AP50876 AC084337.1-201ENST00000524809 686 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.04□□□□□ -1.28
RNF144AP50876 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF144AP50876 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC7.04□□□□□ -1.28
RNF144AP50876 DPPA3P2-201ENST00000553589 478 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 AL355076.3-201ENST00000555838 587 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF144AP50876 AC055876.1-202ENST00000567053 138 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 TUBAP4-201ENST00000569261 416 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC7.04□□□□□ -1.28
RNF144AP50876 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC7.04□□□□□ -1.28
RNF144AP50876 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.04□□□□□ -1.28
RNF144AP50876 AC010719.1-201ENST00000602992 747 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF144AP50876 MIR6761-201ENST00000617899 72 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 SLC20A1P2-201ENST00000618036 966 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 AC025162.2-201ENST00000619602 560 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 KDM5DP1-201ENST00000622542 298 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 AL732618.1-201ENST00000623251 301 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF144AP50876 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.04□□□□□ -1.28
RNF144AP50876 AC073488.2-201ENST00000631903 751 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 AC138649.5-201ENST00000637456 137 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF144AP50876 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF144AP50876 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF144AP50876 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RNF144AP50876 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF144AP50876 AC074198.1-201ENST00000506546 1397 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF144AP50876 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.04□□□□□ -1.28
RNF144AP50876 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF144AP50876 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF144AP50876 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF144AP50876 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF144AP50876 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF144AP50876 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
RNF144AP50876 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF144AP50876 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RNF144AP50876 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RNF144AP50876 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
RNF144AP50876 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RNF144AP50876 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF144AP50876 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF144AP50876 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF144AP50876 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF144AP50876 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
RNF144AP50876 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF144AP50876 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF144AP50876 AC093297.3-201ENST00000607056 2517 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF144AP50876 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF144AP50876 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF144AP50876 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF144AP50876 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF144AP50876 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF144AP50876 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF144AP50876 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF144AP50876 Y_RNA.259-201ENST00000364619 101 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 RNU1-16P-201ENST00000365477 164 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 Y_RNA.381-201ENST00000365666 102 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 Y_RNA.387-201ENST00000383918 102 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 RNU6-43P-201ENST00000384302 107 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 MIR555-201ENST00000384987 96 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 RNU6-510P-201ENST00000391239 108 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 AC133644.1-201ENST00000398171 937 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.03□□□□□ -1.28
RNF144AP50876 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.03□□□□□ -1.28
RNF144AP50876 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.03□□□□□ -1.28
RNF144AP50876 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC7.03□□□□□ -1.28
RNF144AP50876 RPL7P57-201ENST00000423238 740 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF144AP50876 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RNF144AP50876 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF144AP50876 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF144AP50876 GAPDHP19-201ENST00000431768 1005 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 AL606752.1-201ENST00000435442 666 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 RPL5P25-201ENST00000441148 775 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF144AP50876 AL161454.1-201ENST00000446226 569 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.03□□□□□ -1.28
RNF144AP50876 DHFRP3-201ENST00000455595 559 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 AC063943.1-201ENST00000465434 453 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 RN7SL36P-201ENST00000469345 276 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7.03□□□□□ -1.28
RNF144AP50876 AC090638.1-201ENST00000498296 909 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 AC111193.1-201ENST00000504097 155 ntBASIC7.03□□□□□ -1.28
RNF144AP50876 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.03□□□□□ -1.28
RNF144AP50876 CCDC34P1-201ENST00000507441 517 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms