RNA–Protein interactions for RNA: ENST00000507441.1

CCDC34P1-201, Transcript of coiled-coil domain containing 34 pseudogene 1, humanhuman

BASIC

Gene CCDC34P1, Length 517 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34P1-201ENST00000507441 AEBP2Q6ZN18 517 aaPredicted RBP24.51■■□□□ 1.51
CCDC34P1-201ENST00000507441 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
CCDC34P1-201ENST00000507441 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
CCDC34P1-201ENST00000507441 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
CCDC34P1-201ENST00000507441 FOXD1Q16676 465 aa19.68■□□□□ 0.74
CCDC34P1-201ENST00000507441 POTEDQ86YR6 584 aa19.65■□□□□ 0.74
CCDC34P1-201ENST00000507441 MSH5O43196 834 aa18.67■□□□□ 0.58
CCDC34P1-201ENST00000507441 PIAS4Q8N2W9 510 aaPredicted RBP18.21■□□□□ 0.51
CCDC34P1-201ENST00000507441 PPP6R1Q9UPN7 881 aa17.8■□□□□ 0.44
CCDC34P1-201ENST00000507441 ADRA2BP18089 450 aa17.71■□□□□ 0.43
CCDC34P1-201ENST00000507441 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
CCDC34P1-201ENST00000507441 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
CCDC34P1-201ENST00000507441 MAPK8IP2Q13387 824 aaPredicted RBP16.52■□□□□ 0.24
CCDC34P1-201ENST00000507441 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
CCDC34P1-201ENST00000507441 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
CCDC34P1-201ENST00000507441 DCAF8L1A6NGE4 600 aa15.95■□□□□ 0.14
CCDC34P1-201ENST00000507441 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
CCDC34P1-201ENST00000507441 HOXD11P31277 338 aaPredicted RBP15.57■□□□□ 0.08
CCDC34P1-201ENST00000507441 C1QBPQ07021 282 aaKnown RBP15.57■□□□□ 0.08
CCDC34P1-201ENST00000507441 PPP4R3CPQ6ZMV5 832 aa15.31■□□□□ 0.04
CCDC34P1-201ENST00000507441 POTEHQ6S545 545 aa15.23■□□□□ 0.03
CCDC34P1-201ENST00000507441 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
CCDC34P1-201ENST00000507441 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
CCDC34P1-201ENST00000507441 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
CCDC34P1-201ENST00000507441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.03
CCDC34P1-201ENST00000507441 DSG3P32926 999 aa14.62□□□□□ -0.07
CCDC34P1-201ENST00000507441 CAPN15O75808 1086 aa14.54□□□□□ -0.08
CCDC34P1-201ENST00000507441 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
CCDC34P1-201ENST00000507441 U3KPZ7 1027 aaPredicted RBP14.49□□□□□ -0.09
CCDC34P1-201ENST00000507441 NCBP3Q53F19 620 aaKnown RBP14.43□□□□□ -0.1
CCDC34P1-201ENST00000507441 NPM3O75607 178 aaKnown RBP14.27□□□□□ -0.13
CCDC34P1-201ENST00000507441 ABCB7O75027 752 aa14.17□□□□□ -0.14
CCDC34P1-201ENST00000507441 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
CCDC34P1-201ENST00000507441 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
CCDC34P1-201ENST00000507441 CHRDL2Q6WN34 429 aa13.98□□□□□ -0.17
CCDC34P1-201ENST00000507441 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
CCDC34P1-201ENST00000507441 APLP2Q06481 763 aa13.91□□□□□ -0.18
CCDC34P1-201ENST00000507441 SP7Q8TDD2 431 aaPredicted RBP13.9□□□□□ -0.18
CCDC34P1-201ENST00000507441 SLC4A2P04920 1241 aa13.85□□□□□ -0.19
CCDC34P1-201ENST00000507441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
CCDC34P1-201ENST00000507441 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.21
CCDC34P1-201ENST00000507441 SAMD1Q6SPF0 538 aaPredicted RBP13.61□□□□□ -0.23
CCDC34P1-201ENST00000507441 POLA2Q14181 598 aa13.53□□□□□ -0.24
CCDC34P1-201ENST00000507441 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
CCDC34P1-201ENST00000507441 HAX1O00165 279 aa13.47□□□□□ -0.25
CCDC34P1-201ENST00000507441 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
CCDC34P1-201ENST00000507441 REM2Q8IYK8 340 aaPredicted RBP13.35□□□□□ -0.27
CCDC34P1-201ENST00000507441 KCNA4P22459 653 aa13.31□□□□□ -0.28
CCDC34P1-201ENST00000507441 EVX2Q03828 476 aa13.27□□□□□ -0.29
CCDC34P1-201ENST00000507441 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
CCDC34P1-201ENST00000507441 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
CCDC34P1-201ENST00000507441 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
CCDC34P1-201ENST00000507441 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
CCDC34P1-201ENST00000507441 ZBTB12Q9Y330 459 aaPredicted RBP13.12□□□□□ -0.31
CCDC34P1-201ENST00000507441 LHX8Q68G74 356 aa13.03□□□□□ -0.32
CCDC34P1-201ENST00000507441 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
CCDC34P1-201ENST00000507441 PLSCR2Q9NRY7 297 aa12.93□□□□□ -0.34
CCDC34P1-201ENST00000507441 GABBR2O75899 941 aa12.89□□□□□ -0.35
CCDC34P1-201ENST00000507441 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
CCDC34P1-201ENST00000507441 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
CCDC34P1-201ENST00000507441 CLEC11AQ9Y240 323 aa12.75□□□□□ -0.37
CCDC34P1-201ENST00000507441 SPDYE2BA6NHP3 402 aa12.69□□□□□ -0.38
CCDC34P1-201ENST00000507441 SPDYE6P0CI01 402 aa12.69□□□□□ -0.38
CCDC34P1-201ENST00000507441 SPDYE2Q495Y8 402 aa12.69□□□□□ -0.38
CCDC34P1-201ENST00000507441 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
CCDC34P1-201ENST00000507441 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
CCDC34P1-201ENST00000507441 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
CCDC34P1-201ENST00000507441 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
CCDC34P1-201ENST00000507441 FBLN2P98095 1184 aa12.5□□□□□ -0.41
CCDC34P1-201ENST00000507441 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
CCDC34P1-201ENST00000507441 ZNF692Q9BU19 519 aaPredicted RBP12.43□□□□□ -0.42
CCDC34P1-201ENST00000507441 SSUH2Q9Y2M2 353 aa12.43□□□□□ -0.42
CCDC34P1-201ENST00000507441 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
CCDC34P1-201ENST00000507441 SLC4A1APQ9BWU0 796 aaKnown RBP12.38□□□□□ -0.43
CCDC34P1-201ENST00000507441 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
CCDC34P1-201ENST00000507441 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
CCDC34P1-201ENST00000507441 POTEMA6NI47 508 aa12.33□□□□□ -0.44
CCDC34P1-201ENST00000507441 CLCN6P51797 869 aa12.3□□□□□ -0.44
CCDC34P1-201ENST00000507441 OTUD5Q96G74 571 aa12.3□□□□□ -0.44
CCDC34P1-201ENST00000507441 FARP1Q9Y4F1 1045 aaPredicted RBP12.28□□□□□ -0.44
CCDC34P1-201ENST00000507441 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
CCDC34P1-201ENST00000507441 POTEGQ6S5H5 508 aa12.27□□□□□ -0.45
CCDC34P1-201ENST00000507441 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
CCDC34P1-201ENST00000507441 ZBTB22O15209 634 aa12.23□□□□□ -0.45
CCDC34P1-201ENST00000507441 POTEB2H3BUK9 544 aa12.21□□□□□ -0.45
CCDC34P1-201ENST00000507441 ZNF579Q8NAF0 562 aaKnown RBP12.17□□□□□ -0.46
CCDC34P1-201ENST00000507441 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
CCDC34P1-201ENST00000507441 ZRANB1Q9UGI0 708 aa12.13□□□□□ -0.47
CCDC34P1-201ENST00000507441 PCDH10Q9P2E7 1040 aa12.07□□□□□ -0.48
CCDC34P1-201ENST00000507441 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
CCDC34P1-201ENST00000507441 LCE2DQ5TA82 110 aaPredicted RBP11.93□□□□□ -0.5
CCDC34P1-201ENST00000507441 PHF12Q96QT6 1004 aa11.93□□□□□ -0.5
CCDC34P1-201ENST00000507441 POTEJP0CG39 1038 aa11.89□□□□□ -0.51
CCDC34P1-201ENST00000507441 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
CCDC34P1-201ENST00000507441 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
CCDC34P1-201ENST00000507441 FAM163AQ96GL9 167 aaPredicted RBP11.86□□□□□ -0.51
CCDC34P1-201ENST00000507441 PAK3O75914 559 aaPredicted RBP11.82□□□□□ -0.52
CCDC34P1-201ENST00000507441 MAMSTRQ6ZN01 415 aa11.79□□□□□ -0.52
CCDC34P1-201ENST00000507441 ASTLQ6HA08 431 aaPredicted RBP11.77□□□□□ -0.53
CCDC34P1-201ENST00000507441 SLC39A7Q92504 469 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms