Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 ELOCP10-201ENST00000440624 327 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AL031681.1-201ENST00000443304 400 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 RPL7P38-201ENST00000488396 739 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 KLRA1P-201ENST00000503499 986 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 ARL2BPP5-201ENST00000523141 481 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 RFPL1S-203ENST00000539579 330 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC023827.2-201ENST00000566880 1061 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AP005262.1-201ENST00000582646 997 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC010463.3-201ENST00000594077 500 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC025165.5-201ENST00000602802 578 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC020765.1-201ENST00000604296 328 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 ELOCP34-201ENST00000604436 327 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 RN7SKP299-201ENST00000606679 301 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC009779.8-202ENST00000607990 932 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC116651.1-201ENST00000609724 556 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AL352984.2-202ENST00000613699 155 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC005858.3-201ENST00000624756 589 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 PCMTD1P7-201ENST00000634506 357 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 MAPK10-365ENST00000641902 3825 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 AC010329.2-201ENST00000595195 2737 ntBASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRAIPQ9BWF2 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 NLRP3P1-201ENST00000622303 1785 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AC008549.2-201ENST00000333482 706 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 RNU1-146P-201ENST00000364015 165 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 RNU1-74P-201ENST00000384108 171 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 EI24P3-201ENST00000399046 1062 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 PRRC2CP1-201ENST00000404428 159 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AL133260.1-201ENST00000405720 405 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 MGAT2P2-201ENST00000427194 797 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AC128677.1-201ENST00000436016 442 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 GAPDHP20-201ENST00000444107 1007 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AL034399.1-201ENST00000451535 380 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AKR1D1P1-201ENST00000457236 936 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 RPS15AP1-201ENST00000457423 391 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 RPS10P20-201ENST00000494130 463 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 MTND4P2-201ENST00000507767 1203 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 HMGB1P28-201ENST00000507778 552 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 GAPDHP62-201ENST00000515313 990 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AC138517.1-201ENST00000515724 568 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 OR5BK1P-201ENST00000550421 823 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AC020914.7-201ENST00000594477 545 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AL359715.5-201ENST00000623431 443 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AC007603.3-201ENST00000636915 979 ntBASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.49□□□□□ -1.21
TRAIPQ9BWF2 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms