Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC055764.2-201ENST00000610089 670 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AL359535.1-201ENST00000612100 1087 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AC073488.8-201ENST00000631952 757 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AL590065.1-201ENST00000603371 4774 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 AL034370.1-201ENST00000397254 1590 ntBASIC7.63□□□□□ -1.19
RNF135Q8IUD6 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RNF135Q8IUD6 CASC19-260ENST00000641828 2001 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AF131215.2-201ENST00000531549 1710 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 Y_RNA.296-201ENST00000364930 108 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 SNORA70G-201ENST00000383923 142 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 Y_RNA.509-201ENST00000384506 99 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 MTCO3P40-201ENST00000392516 676 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC109780.2-201ENST00000413467 845 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 GAPDHP19-201ENST00000431768 1005 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 RPL31P44-201ENST00000447680 377 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 RN7SL870P-201ENST00000460111 296 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC010307.1-201ENST00000467206 836 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 TRBV8-2-201ENST00000475637 270 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC013828.1-201ENST00000481845 158 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC108078.1-201ENST00000508073 725 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 OR5M7P-201ENST00000526140 972 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC005363.1-201ENST00000530779 351 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AL442663.2-201ENST00000554385 511 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC136618.2-201ENST00000575091 400 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC012146.2-201ENST00000576545 416 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 SNORD39.2-201ENST00000579995 76 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AL390877.1-201ENST00000605704 214 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 RNU6-88P-201ENST00000606801 100 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC093388.1-201ENST00000609166 430 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC103710.1-201ENST00000610003 901 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AL359880.1-201ENST00000621879 266 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC120349.2-201ENST00000625002 298 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 CRYM-AS1-204ENST00000637983 556 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 MKKS-204ENST00000639674 192 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 AC090132.1-201ENST00000524071 1480 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 CDR1-202ENST00000625883 1485 ntBASIC7.62□□□□□ -1.19
RNF135Q8IUD6 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
RNF135Q8IUD6 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms