Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC3.04□□□□□ -1.92
HSPG2P98160 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC3.04□□□□□ -1.92
HSPG2P98160 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC3.04□□□□□ -1.92
HSPG2P98160 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.04□□□□□ -1.92
HSPG2P98160 SNORD125-201ENST00000459538 96 ntBASIC3.04□□□□□ -1.92
HSPG2P98160 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.04□□□□□ -1.92
HSPG2P98160 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.04□□□□□ -1.92
HSPG2P98160 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.04□□□□□ -1.92
HSPG2P98160 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.04□□□□□ -1.92
HSPG2P98160 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.04□□□□□ -1.92
HSPG2P98160 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC3.04□□□□□ -1.92
HSPG2P98160 AC012213.2-201ENST00000562917 4597 ntBASIC3.04□□□□□ -1.92
HSPG2P98160 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC3.04□□□□□ -1.92
HSPG2P98160 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HSPG2P98160 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HSPG2P98160 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC3.04□□□□□ -1.92
HSPG2P98160 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.04□□□□□ -1.92
HSPG2P98160 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
HSPG2P98160 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 RN7SKP202-201ENST00000410439 330 ntBASIC3.04□□□□□ -1.92
HSPG2P98160 RPL34P27-201ENST00000428810 349 ntBASIC3.04□□□□□ -1.92
HSPG2P98160 PRPF38AP1-201ENST00000451976 933 ntBASIC3.04□□□□□ -1.92
HSPG2P98160 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.04□□□□□ -1.92
HSPG2P98160 OR2A3P-201ENST00000493774 953 ntBASIC3.04□□□□□ -1.92
HSPG2P98160 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC3.04□□□□□ -1.92
HSPG2P98160 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 AC009027.1-201ENST00000604510 479 ntBASIC3.04□□□□□ -1.92
HSPG2P98160 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 UGT2B24P-201ENST00000514441 1597 ntBASIC3.04□□□□□ -1.92
HSPG2P98160 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC3.04□□□□□ -1.92
HSPG2P98160 ATP5HP3-201ENST00000396994 486 ntBASIC3.04□□□□□ -1.92
HSPG2P98160 HYALP1-201ENST00000417674 1279 ntBASIC3.04□□□□□ -1.92
HSPG2P98160 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HSPG2P98160 RN7SL98P-201ENST00000462271 300 ntBASIC3.04□□□□□ -1.92
HSPG2P98160 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC3.04□□□□□ -1.92
HSPG2P98160 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.04□□□□□ -1.92
HSPG2P98160 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC3.04□□□□□ -1.92
HSPG2P98160 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HSPG2P98160 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.04□□□□□ -1.92
HSPG2P98160 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HSPG2P98160 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.03□□□□□ -1.92
HSPG2P98160 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HSPG2P98160 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.03□□□□□ -1.92
HSPG2P98160 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.03□□□□□ -1.92
HSPG2P98160 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC3.03□□□□□ -1.92
HSPG2P98160 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.03□□□□□ -1.92
HSPG2P98160 AC010547.7-201ENST00000570323 333 ntBASIC3.03□□□□□ -1.92
HSPG2P98160 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC3.03□□□□□ -1.92
HSPG2P98160 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC3.03□□□□□ -1.92
HSPG2P98160 CDRT1-208ENST00000630868 794 ntBASIC3.03□□□□□ -1.92
HSPG2P98160 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC3.03□□□□□ -1.92
HSPG2P98160 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC3.03□□□□□ -1.92
HSPG2P98160 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.03□□□□□ -1.92
HSPG2P98160 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.03□□□□□ -1.92
HSPG2P98160 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.03□□□□□ -1.92
HSPG2P98160 CRIP1P1-201ENST00000427567 185 ntBASIC3.03□□□□□ -1.92
HSPG2P98160 RPS29P17-201ENST00000430795 166 ntBASIC3.03□□□□□ -1.92
HSPG2P98160 RPS5P7-201ENST00000456664 608 ntBASIC3.03□□□□□ -1.92
HSPG2P98160 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC3.03□□□□□ -1.92
HSPG2P98160 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.03□□□□□ -1.92
HSPG2P98160 AL356863.1-201ENST00000623378 1080 ntBASIC3.03□□□□□ -1.92
HSPG2P98160 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.03□□□□□ -1.92
HSPG2P98160 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HSPG2P98160 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
HSPG2P98160 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 UGT2B26P-201ENST00000508672 1613 ntBASIC3.03□□□□□ -1.92
HSPG2P98160 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 FBN2-208ENST00000619499 10154 ntTSL 5 BASIC3.03□□□□□ -1.92
HSPG2P98160 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HSPG2P98160 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HSPG2P98160 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.03□□□□□ -1.92
HSPG2P98160 UQCRBP1-201ENST00000421129 336 ntBASIC3.03□□□□□ -1.92
HSPG2P98160 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms