Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.62□□□□□ -1.51
CASQ1P31415 RPL5P19-201ENST00000404228 893 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 AL035079.1-201ENST00000405210 287 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 EIF4A1P3-201ENST00000411521 244 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.62□□□□□ -1.51
CASQ1P31415 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.62□□□□□ -1.51
CASQ1P31415 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CASQ1P31415 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.62□□□□□ -1.51
CASQ1P31415 AL138787.1-202ENST00000437804 898 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 AC007383.1-201ENST00000445875 636 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 AL031584.1-201ENST00000447169 754 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 AC022431.1-201ENST00000450941 438 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 AC009963.3-201ENST00000458090 486 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.62□□□□□ -1.51
CASQ1P31415 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.62□□□□□ -1.51
CASQ1P31415 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.62□□□□□ -1.51
CASQ1P31415 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.62□□□□□ -1.51
CASQ1P31415 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.62□□□□□ -1.51
CASQ1P31415 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.62□□□□□ -1.51
CASQ1P31415 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.62□□□□□ -1.51
CASQ1P31415 RN7SL708P-201ENST00000580952 299 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 RN7SL52P-201ENST00000584271 284 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.62□□□□□ -1.51
CASQ1P31415 AC009597.2-201ENST00000604659 592 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CASQ1P31415 RN7SL787P-201ENST00000613000 284 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 MIR6721-201ENST00000617181 87 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 RN7SL544P-201ENST00000617232 284 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.62□□□□□ -1.51
CASQ1P31415 RN7SL763P-201ENST00000620922 284 ntBASIC5.62□□□□□ -1.51
CASQ1P31415 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CASQ1P31415 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
CASQ1P31415 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CASQ1P31415 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
CASQ1P31415 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CASQ1P31415 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CASQ1P31415 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CASQ1P31415 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CASQ1P31415 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CASQ1P31415 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CASQ1P31415 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CASQ1P31415 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CASQ1P31415 TMSB4XP2-201ENST00000335179 210 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CASQ1P31415 AC019155.1-201ENST00000382242 574 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.61□□□□□ -1.51
CASQ1P31415 RBBP4P5-201ENST00000398583 1266 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 CYCSP10-201ENST00000417973 294 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CASQ1P31415 NAP1L4P2-201ENST00000425958 899 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.61□□□□□ -1.51
CASQ1P31415 BX323845.3-201ENST00000428215 527 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.61□□□□□ -1.51
CASQ1P31415 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.61□□□□□ -1.51
CASQ1P31415 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.61□□□□□ -1.51
CASQ1P31415 PPIAP27-201ENST00000453800 265 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 RPS23P6-201ENST00000466136 431 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 RN7SL189P-201ENST00000468631 289 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 AC058823.1-201ENST00000485315 474 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.61□□□□□ -1.51
CASQ1P31415 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.61□□□□□ -1.51
CASQ1P31415 UGT2B26P-201ENST00000508672 1613 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 LDHAP1-201ENST00000509421 992 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 RNA5SP96-201ENST00000516041 107 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 snoU109.6-201ENST00000516831 118 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 AC022882.1-201ENST00000532142 501 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 AP004607.2-201ENST00000533949 322 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.61□□□□□ -1.51
CASQ1P31415 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.61□□□□□ -1.51
CASQ1P31415 AC027279.1-201ENST00000568885 4284 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.61□□□□□ -1.51
CASQ1P31415 AL049829.3-202ENST00000604278 711 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 AC124916.2-201ENST00000604416 224 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CASQ1P31415 AC108359.1-201ENST00000616451 1211 ntBASIC5.61□□□□□ -1.51
CASQ1P31415 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.61□□□□□ -1.51
CASQ1P31415 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.61□□□□□ -1.51
CASQ1P31415 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.61□□□□□ -1.51
CASQ1P31415 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CASQ1P31415 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.6□□□□□ -1.51
CASQ1P31415 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CASQ1P31415 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.6□□□□□ -1.51
CASQ1P31415 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CASQ1P31415 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CASQ1P31415 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CASQ1P31415 SRRM1P3-201ENST00000426911 2678 ntBASIC5.6□□□□□ -1.51
CASQ1P31415 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CASQ1P31415 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CASQ1P31415 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CASQ1P31415 U3.32-201ENST00000408116 212 ntBASIC5.6□□□□□ -1.51
CASQ1P31415 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.6□□□□□ -1.51
CASQ1P31415 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.6□□□□□ -1.51
CASQ1P31415 AC092570.3-201ENST00000420113 693 ntBASIC5.6□□□□□ -1.51
CASQ1P31415 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.6□□□□□ -1.51
CASQ1P31415 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.6□□□□□ -1.51
CASQ1P31415 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.6□□□□□ -1.51
CASQ1P31415 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.6□□□□□ -1.51
CASQ1P31415 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.6□□□□□ -1.51
CASQ1P31415 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.6□□□□□ -1.51
CASQ1P31415 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms